Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 CCDC92B-201ENST00000575506 885 ntBASIC20■□□□□ 0.79
KRTCAP3Q53RY4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20■□□□□ 0.79
KRTCAP3Q53RY4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRTCAP3Q53RY4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRTCAP3Q53RY4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRTCAP3Q53RY4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRTCAP3Q53RY4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.99■□□□□ 0.79
KRTCAP3Q53RY4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRTCAP3Q53RY4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRTCAP3Q53RY4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.99■□□□□ 0.79
KRTCAP3Q53RY4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.99■□□□□ 0.79
KRTCAP3Q53RY4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRTCAP3Q53RY4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
KRTCAP3Q53RY4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRTCAP3Q53RY4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.99■□□□□ 0.79
KRTCAP3Q53RY4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.99■□□□□ 0.79
KRTCAP3Q53RY4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.99■□□□□ 0.79
KRTCAP3Q53RY4 AC138932.3-201ENST00000567634 1902 ntBASIC19.99■□□□□ 0.79
KRTCAP3Q53RY4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
KRTCAP3Q53RY4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.99■□□□□ 0.79
KRTCAP3Q53RY4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.99■□□□□ 0.79
KRTCAP3Q53RY4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
KRTCAP3Q53RY4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.99■□□□□ 0.79
KRTCAP3Q53RY4 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.98■□□□□ 0.79
KRTCAP3Q53RY4 KRT18P14-201ENST00000534205 1250 ntBASIC19.98■□□□□ 0.79
KRTCAP3Q53RY4 TERF1P2-201ENST00000583350 1212 ntBASIC19.98■□□□□ 0.79
KRTCAP3Q53RY4 NTF6G-201ENST00000591094 616 ntBASIC19.98■□□□□ 0.79
KRTCAP3Q53RY4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
KRTCAP3Q53RY4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.98■□□□□ 0.79
KRTCAP3Q53RY4 IKBKGP1-201ENST00000612193 1073 ntBASIC19.98■□□□□ 0.79
KRTCAP3Q53RY4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
KRTCAP3Q53RY4 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRTCAP3Q53RY4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRTCAP3Q53RY4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KRTCAP3Q53RY4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KRTCAP3Q53RY4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KRTCAP3Q53RY4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KRTCAP3Q53RY4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
KRTCAP3Q53RY4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.97■□□□□ 0.79
KRTCAP3Q53RY4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.97■□□□□ 0.79
KRTCAP3Q53RY4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
KRTCAP3Q53RY4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
KRTCAP3Q53RY4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
KRTCAP3Q53RY4 AC090192.1-201ENST00000517740 490 ntBASIC19.97■□□□□ 0.79
KRTCAP3Q53RY4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KRTCAP3Q53RY4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
KRTCAP3Q53RY4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KRTCAP3Q53RY4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.97■□□□□ 0.79
KRTCAP3Q53RY4 AC105233.4-201ENST00000642045 216 ntBASIC19.97■□□□□ 0.79
KRTCAP3Q53RY4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRTCAP3Q53RY4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRTCAP3Q53RY4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.97■□□□□ 0.79
KRTCAP3Q53RY4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRTCAP3Q53RY4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.96■□□□□ 0.79
KRTCAP3Q53RY4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KRTCAP3Q53RY4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRTCAP3Q53RY4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KRTCAP3Q53RY4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.96■□□□□ 0.79
KRTCAP3Q53RY4 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.96■□□□□ 0.79
KRTCAP3Q53RY4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.96■□□□□ 0.79
KRTCAP3Q53RY4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.96■□□□□ 0.79
KRTCAP3Q53RY4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KRTCAP3Q53RY4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
KRTCAP3Q53RY4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.96■□□□□ 0.79
KRTCAP3Q53RY4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.96■□□□□ 0.79
KRTCAP3Q53RY4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
KRTCAP3Q53RY4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRTCAP3Q53RY4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRTCAP3Q53RY4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.95■□□□□ 0.78
KRTCAP3Q53RY4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
KRTCAP3Q53RY4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRTCAP3Q53RY4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRTCAP3Q53RY4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRTCAP3Q53RY4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.95■□□□□ 0.78
KRTCAP3Q53RY4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRTCAP3Q53RY4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.95■□□□□ 0.78
KRTCAP3Q53RY4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
KRTCAP3Q53RY4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRTCAP3Q53RY4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
KRTCAP3Q53RY4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KRTCAP3Q53RY4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRTCAP3Q53RY4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRTCAP3Q53RY4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.94■□□□□ 0.78
KRTCAP3Q53RY4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.94■□□□□ 0.78
KRTCAP3Q53RY4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.94■□□□□ 0.78
KRTCAP3Q53RY4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.94■□□□□ 0.78
KRTCAP3Q53RY4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.94■□□□□ 0.78
KRTCAP3Q53RY4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.94■□□□□ 0.78
KRTCAP3Q53RY4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.94■□□□□ 0.78
KRTCAP3Q53RY4 AC068587.7-201ENST00000641602 218 ntBASIC19.94■□□□□ 0.78
KRTCAP3Q53RY4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRTCAP3Q53RY4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.94■□□□□ 0.78
KRTCAP3Q53RY4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KRTCAP3Q53RY4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRTCAP3Q53RY4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRTCAP3Q53RY4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KRTCAP3Q53RY4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KRTCAP3Q53RY4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRTCAP3Q53RY4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.93■□□□□ 0.78
KRTCAP3Q53RY4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms