Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFHR3Q02985 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.39■□□□□ 0.37
CFHR3Q02985 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFHR3Q02985 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFHR3Q02985 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.39■□□□□ 0.37
CFHR3Q02985 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFHR3Q02985 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CFHR3Q02985 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.39■□□□□ 0.37
CFHR3Q02985 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CFHR3Q02985 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFHR3Q02985 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFHR3Q02985 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFHR3Q02985 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CFHR3Q02985 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFHR3Q02985 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFHR3Q02985 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CFHR3Q02985 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFHR3Q02985 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CFHR3Q02985 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFHR3Q02985 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CFHR3Q02985 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.38■□□□□ 0.37
CFHR3Q02985 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.38■□□□□ 0.37
CFHR3Q02985 MIR939-201ENST00000401314 82 ntBASIC17.38■□□□□ 0.37
CFHR3Q02985 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CFHR3Q02985 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.38■□□□□ 0.37
CFHR3Q02985 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.38■□□□□ 0.37
CFHR3Q02985 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.38■□□□□ 0.37
CFHR3Q02985 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFHR3Q02985 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFHR3Q02985 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.37■□□□□ 0.37
CFHR3Q02985 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CFHR3Q02985 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CFHR3Q02985 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CFHR3Q02985 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CFHR3Q02985 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CFHR3Q02985 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CFHR3Q02985 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CFHR3Q02985 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.37■□□□□ 0.37
CFHR3Q02985 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CFHR3Q02985 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CFHR3Q02985 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CFHR3Q02985 AF213884.3-201ENST00000563833 479 ntBASIC17.37■□□□□ 0.37
CFHR3Q02985 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.37■□□□□ 0.37
CFHR3Q02985 AL136967.2-201ENST00000623968 743 ntBASIC17.37■□□□□ 0.37
CFHR3Q02985 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CFHR3Q02985 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
CFHR3Q02985 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.37■□□□□ 0.37
CFHR3Q02985 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.37■□□□□ 0.37
CFHR3Q02985 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.37■□□□□ 0.37
CFHR3Q02985 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.37■□□□□ 0.37
CFHR3Q02985 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.37■□□□□ 0.37
CFHR3Q02985 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CFHR3Q02985 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.36■□□□□ 0.37
CFHR3Q02985 OR2I1P-207ENST00000453522 948 ntBASIC17.36■□□□□ 0.37
CFHR3Q02985 AC142381.2-201ENST00000566120 298 ntBASIC17.36■□□□□ 0.37
CFHR3Q02985 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.36■□□□□ 0.37
CFHR3Q02985 AC019069.1-201ENST00000610008 1333 ntBASIC17.36■□□□□ 0.37
CFHR3Q02985 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CFHR3Q02985 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CFHR3Q02985 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CFHR3Q02985 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.36■□□□□ 0.37
CFHR3Q02985 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CFHR3Q02985 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CFHR3Q02985 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.35■□□□□ 0.37
CFHR3Q02985 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CFHR3Q02985 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CFHR3Q02985 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CFHR3Q02985 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CFHR3Q02985 BX842568.3-201ENST00000418104 571 ntBASIC17.35■□□□□ 0.37
CFHR3Q02985 AC027682.1-201ENST00000562846 899 ntBASIC17.35■□□□□ 0.37
CFHR3Q02985 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CFHR3Q02985 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CFHR3Q02985 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CFHR3Q02985 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.35■□□□□ 0.37
CFHR3Q02985 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CFHR3Q02985 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CFHR3Q02985 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.35■□□□□ 0.37
CFHR3Q02985 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CFHR3Q02985 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
CFHR3Q02985 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CFHR3Q02985 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CFHR3Q02985 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CFHR3Q02985 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CFHR3Q02985 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CFHR3Q02985 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.34■□□□□ 0.37
CFHR3Q02985 AC091305.1-201ENST00000479476 895 ntBASIC17.34■□□□□ 0.37
CFHR3Q02985 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CFHR3Q02985 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CFHR3Q02985 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CFHR3Q02985 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CFHR3Q02985 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CFHR3Q02985 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CFHR3Q02985 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CFHR3Q02985 SLC47A1P1-202ENST00000449666 945 ntBASIC17.33■□□□□ 0.36
CFHR3Q02985 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CFHR3Q02985 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.33■□□□□ 0.36
CFHR3Q02985 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.33■□□□□ 0.36
CFHR3Q02985 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.33■□□□□ 0.36
CFHR3Q02985 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.33■□□□□ 0.36
CFHR3Q02985 AC233992.3-201ENST00000607491 485 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms