Protein–RNA interactions for Protein: P63272

SUPT4H1, Transcription elongation factor SPT4, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1P63272 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SUPT4H1P63272 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SUPT4H1P63272 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SUPT4H1P63272 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SUPT4H1P63272 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SUPT4H1P63272 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SUPT4H1P63272 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SUPT4H1P63272 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SUPT4H1P63272 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.36■□□□□ 0.53
SUPT4H1P63272 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SUPT4H1P63272 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.36■□□□□ 0.53
SUPT4H1P63272 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SUPT4H1P63272 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SUPT4H1P63272 AC018755.3-202ENST00000596210 929 ntBASIC18.36■□□□□ 0.53
SUPT4H1P63272 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SUPT4H1P63272 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SUPT4H1P63272 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SUPT4H1P63272 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SUPT4H1P63272 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SUPT4H1P63272 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SUPT4H1P63272 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SUPT4H1P63272 AC010542.4-201ENST00000563151 1910 ntBASIC18.35■□□□□ 0.53
SUPT4H1P63272 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SUPT4H1P63272 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.35■□□□□ 0.53
SUPT4H1P63272 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.35■□□□□ 0.53
SUPT4H1P63272 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SUPT4H1P63272 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SUPT4H1P63272 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SUPT4H1P63272 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SUPT4H1P63272 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SUPT4H1P63272 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SUPT4H1P63272 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
SUPT4H1P63272 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SUPT4H1P63272 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.34■□□□□ 0.53
SUPT4H1P63272 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SUPT4H1P63272 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SUPT4H1P63272 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SUPT4H1P63272 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.34■□□□□ 0.53
SUPT4H1P63272 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.34■□□□□ 0.53
SUPT4H1P63272 AC011551.1-201ENST00000614101 683 ntBASIC18.34■□□□□ 0.53
SUPT4H1P63272 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SUPT4H1P63272 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SUPT4H1P63272 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SUPT4H1P63272 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
SUPT4H1P63272 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.33■□□□□ 0.53
SUPT4H1P63272 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.33■□□□□ 0.53
SUPT4H1P63272 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.33■□□□□ 0.52
SUPT4H1P63272 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SUPT4H1P63272 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SUPT4H1P63272 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SUPT4H1P63272 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SUPT4H1P63272 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SUPT4H1P63272 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.32■□□□□ 0.52
SUPT4H1P63272 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SUPT4H1P63272 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SUPT4H1P63272 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SUPT4H1P63272 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
SUPT4H1P63272 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.32■□□□□ 0.52
SUPT4H1P63272 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SUPT4H1P63272 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SUPT4H1P63272 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SUPT4H1P63272 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SUPT4H1P63272 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SUPT4H1P63272 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.32■□□□□ 0.52
SUPT4H1P63272 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SUPT4H1P63272 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SUPT4H1P63272 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SUPT4H1P63272 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SUPT4H1P63272 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.31■□□□□ 0.52
SUPT4H1P63272 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.31■□□□□ 0.52
SUPT4H1P63272 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SUPT4H1P63272 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SUPT4H1P63272 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SUPT4H1P63272 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.31■□□□□ 0.52
SUPT4H1P63272 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SUPT4H1P63272 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.31■□□□□ 0.52
SUPT4H1P63272 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SUPT4H1P63272 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SUPT4H1P63272 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.3■□□□□ 0.52
SUPT4H1P63272 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SUPT4H1P63272 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.3■□□□□ 0.52
SUPT4H1P63272 LONRF2P2-201ENST00000439212 571 ntBASIC18.3■□□□□ 0.52
SUPT4H1P63272 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SUPT4H1P63272 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SUPT4H1P63272 AC005229.4-201ENST00000610085 2198 ntBASIC18.3■□□□□ 0.52
SUPT4H1P63272 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
SUPT4H1P63272 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.3■□□□□ 0.52
SUPT4H1P63272 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SUPT4H1P63272 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SUPT4H1P63272 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SUPT4H1P63272 AC073130.3-201ENST00000624389 2278 ntBASIC18.29■□□□□ 0.52
SUPT4H1P63272 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.29■□□□□ 0.52
SUPT4H1P63272 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SUPT4H1P63272 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SUPT4H1P63272 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SUPT4H1P63272 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SUPT4H1P63272 GPX1-201ENST00000419349 1106 ntBASIC18.29■□□□□ 0.52
SUPT4H1P63272 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SUPT4H1P63272 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SUPT4H1P63272 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms