Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRA2BP62995 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRA2BP62995 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21■□□□□ 0.95
TRA2BP62995 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
TRA2BP62995 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
TRA2BP62995 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
TRA2BP62995 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TRA2BP62995 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRA2BP62995 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRA2BP62995 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRA2BP62995 AL356441.2-201ENST00000443009 864 ntBASIC21■□□□□ 0.95
TRA2BP62995 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRA2BP62995 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRA2BP62995 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRA2BP62995 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21■□□□□ 0.95
TRA2BP62995 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRA2BP62995 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRA2BP62995 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21■□□□□ 0.95
TRA2BP62995 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TRA2BP62995 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRA2BP62995 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRA2BP62995 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRA2BP62995 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TRA2BP62995 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRA2BP62995 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRA2BP62995 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRA2BP62995 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRA2BP62995 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TRA2BP62995 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.99■□□□□ 0.95
TRA2BP62995 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
TRA2BP62995 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRA2BP62995 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRA2BP62995 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.99■□□□□ 0.95
TRA2BP62995 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TRA2BP62995 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.99■□□□□ 0.95
TRA2BP62995 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRA2BP62995 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRA2BP62995 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TRA2BP62995 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRA2BP62995 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRA2BP62995 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRA2BP62995 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
TRA2BP62995 AL499627.2-201ENST00000606283 725 ntBASIC20.98■□□□□ 0.95
TRA2BP62995 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRA2BP62995 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRA2BP62995 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRA2BP62995 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRA2BP62995 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.98■□□□□ 0.95
TRA2BP62995 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRA2BP62995 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRA2BP62995 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TRA2BP62995 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
TRA2BP62995 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.97■□□□□ 0.95
TRA2BP62995 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRA2BP62995 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRA2BP62995 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TRA2BP62995 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRA2BP62995 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.97■□□□□ 0.95
TRA2BP62995 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.97■□□□□ 0.95
TRA2BP62995 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRA2BP62995 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.97■□□□□ 0.95
TRA2BP62995 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TRA2BP62995 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.96■□□□□ 0.95
TRA2BP62995 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.96■□□□□ 0.95
TRA2BP62995 AC233723.2-201ENST00000623798 2106 ntBASIC20.96■□□□□ 0.95
TRA2BP62995 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRA2BP62995 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRA2BP62995 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.96■□□□□ 0.95
TRA2BP62995 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRA2BP62995 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRA2BP62995 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.96■□□□□ 0.95
TRA2BP62995 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRA2BP62995 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRA2BP62995 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRA2BP62995 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.95■□□□□ 0.94
TRA2BP62995 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.95■□□□□ 0.94
TRA2BP62995 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.95■□□□□ 0.94
TRA2BP62995 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRA2BP62995 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRA2BP62995 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.95■□□□□ 0.94
TRA2BP62995 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
TRA2BP62995 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRA2BP62995 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRA2BP62995 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRA2BP62995 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRA2BP62995 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.94■□□□□ 0.94
TRA2BP62995 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.94■□□□□ 0.94
TRA2BP62995 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.94■□□□□ 0.94
TRA2BP62995 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.94■□□□□ 0.94
TRA2BP62995 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRA2BP62995 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRA2BP62995 AC127496.7-201ENST00000625110 1798 ntBASIC20.94■□□□□ 0.94
TRA2BP62995 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRA2BP62995 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRA2BP62995 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
TRA2BP62995 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRA2BP62995 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRA2BP62995 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TRA2BP62995 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.93■□□□□ 0.94
TRA2BP62995 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms