Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC17.47■□□□□ 0.39
RAB5BP61020 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.47■□□□□ 0.39
RAB5BP61020 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB5BP61020 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB5BP61020 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB5BP61020 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.46■□□□□ 0.39
RAB5BP61020 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
RAB5BP61020 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB5BP61020 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC17.46■□□□□ 0.39
RAB5BP61020 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RAB5BP61020 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB5BP61020 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RAB5BP61020 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RAB5BP61020 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
RAB5BP61020 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
RAB5BP61020 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.45■□□□□ 0.38
RAB5BP61020 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB5BP61020 AL157384.1-201ENST00000445995 2473 ntBASIC17.45■□□□□ 0.38
RAB5BP61020 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB5BP61020 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB5BP61020 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB5BP61020 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB5BP61020 AC135983.2-203ENST00000454486 1613 ntBASIC17.45■□□□□ 0.38
RAB5BP61020 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB5BP61020 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC17.45■□□□□ 0.38
RAB5BP61020 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB5BP61020 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB5BP61020 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB5BP61020 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB5BP61020 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB5BP61020 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB5BP61020 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB5BP61020 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB5BP61020 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB5BP61020 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC17.44■□□□□ 0.38
RAB5BP61020 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB5BP61020 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB5BP61020 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB5BP61020 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
RAB5BP61020 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RAB5BP61020 AC005229.4-201ENST00000610085 2198 ntBASIC17.44■□□□□ 0.38
RAB5BP61020 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB5BP61020 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB5BP61020 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RAB5BP61020 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB5BP61020 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB5BP61020 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB5BP61020 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.44■□□□□ 0.38
RAB5BP61020 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB5BP61020 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
RAB5BP61020 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RAB5BP61020 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RAB5BP61020 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB5BP61020 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB5BP61020 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB5BP61020 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB5BP61020 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB5BP61020 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB5BP61020 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
RAB5BP61020 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB5BP61020 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB5BP61020 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB5BP61020 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB5BP61020 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB5BP61020 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB5BP61020 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB5BP61020 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB5BP61020 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB5BP61020 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RAB5BP61020 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB5BP61020 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RAB5BP61020 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RAB5BP61020 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.43■□□□□ 0.38
RAB5BP61020 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RAB5BP61020 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB5BP61020 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RAB5BP61020 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB5BP61020 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB5BP61020 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.42■□□□□ 0.38
RAB5BP61020 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB5BP61020 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.42■□□□□ 0.38
RAB5BP61020 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
RAB5BP61020 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB5BP61020 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.42■□□□□ 0.38
RAB5BP61020 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB5BP61020 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB5BP61020 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB5BP61020 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB5BP61020 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB5BP61020 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB5BP61020 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB5BP61020 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB5BP61020 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB5BP61020 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB5BP61020 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB5BP61020 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB5BP61020 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB5BP61020 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB5BP61020 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB5BP61020 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms