Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22■■□□□ 1.11
CDKN2DP55273 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDKN2DP55273 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22■■□□□ 1.11
CDKN2DP55273 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
CDKN2DP55273 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22■■□□□ 1.11
CDKN2DP55273 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22■■□□□ 1.11
CDKN2DP55273 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDKN2DP55273 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22■■□□□ 1.11
CDKN2DP55273 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDKN2DP55273 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDKN2DP55273 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDKN2DP55273 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDKN2DP55273 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDKN2DP55273 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
CDKN2DP55273 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDKN2DP55273 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDKN2DP55273 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDKN2DP55273 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.99■■□□□ 1.11
CDKN2DP55273 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDKN2DP55273 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.99■■□□□ 1.11
CDKN2DP55273 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
CDKN2DP55273 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
CDKN2DP55273 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.99■■□□□ 1.11
CDKN2DP55273 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CDKN2DP55273 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDKN2DP55273 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.98■■□□□ 1.11
CDKN2DP55273 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.98■■□□□ 1.11
CDKN2DP55273 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDKN2DP55273 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDKN2DP55273 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDKN2DP55273 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CDKN2DP55273 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CDKN2DP55273 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CDKN2DP55273 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDKN2DP55273 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDKN2DP55273 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDKN2DP55273 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDKN2DP55273 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDKN2DP55273 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDKN2DP55273 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDKN2DP55273 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.96■■□□□ 1.11
CDKN2DP55273 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDKN2DP55273 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDKN2DP55273 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDKN2DP55273 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDKN2DP55273 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDKN2DP55273 ESRRAP2-201ENST00000418437 1549 ntBASIC21.96■■□□□ 1.11
CDKN2DP55273 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.95■■□□□ 1.1
CDKN2DP55273 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.95■■□□□ 1.1
CDKN2DP55273 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDKN2DP55273 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDKN2DP55273 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.95■■□□□ 1.1
CDKN2DP55273 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.95■■□□□ 1.1
CDKN2DP55273 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CDKN2DP55273 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.95■■□□□ 1.1
CDKN2DP55273 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.95■■□□□ 1.1
CDKN2DP55273 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDKN2DP55273 DUX4L4-201ENST00000566884 1269 ntBASIC21.95■■□□□ 1.1
CDKN2DP55273 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.95■■□□□ 1.1
CDKN2DP55273 MIR6724-1-201ENST00000616420 92 ntBASIC21.95■■□□□ 1.1
CDKN2DP55273 MIR6724-2-201ENST00000616483 92 ntBASIC21.95■■□□□ 1.1
CDKN2DP55273 MIR6724-4-201ENST00000617390 92 ntBASIC21.95■■□□□ 1.1
CDKN2DP55273 MIR6724-3-201ENST00000622482 92 ntBASIC21.95■■□□□ 1.1
CDKN2DP55273 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.95■■□□□ 1.1
CDKN2DP55273 C17orf82-201ENST00000623772 1530 ntBASIC21.95■■□□□ 1.1
CDKN2DP55273 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
CDKN2DP55273 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDKN2DP55273 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDKN2DP55273 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDKN2DP55273 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDKN2DP55273 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDKN2DP55273 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDKN2DP55273 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.94■■□□□ 1.1
CDKN2DP55273 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDKN2DP55273 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CDKN2DP55273 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CDKN2DP55273 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.94■■□□□ 1.1
CDKN2DP55273 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CDKN2DP55273 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.94■■□□□ 1.1
CDKN2DP55273 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CDKN2DP55273 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
CDKN2DP55273 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDKN2DP55273 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDKN2DP55273 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDKN2DP55273 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDKN2DP55273 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.93■■□□□ 1.1
CDKN2DP55273 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
CDKN2DP55273 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.93■■□□□ 1.1
CDKN2DP55273 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDKN2DP55273 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CDKN2DP55273 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
CDKN2DP55273 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKN2DP55273 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.92■■□□□ 1.1
CDKN2DP55273 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
CDKN2DP55273 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKN2DP55273 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDKN2DP55273 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKN2DP55273 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKN2DP55273 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CDKN2DP55273 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms