Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.31■■□□□ 1
KNTC1P50748 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.31■■□□□ 1
KNTC1P50748 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.31■■□□□ 1
KNTC1P50748 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KNTC1P50748 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KNTC1P50748 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
KNTC1P50748 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.3■■□□□ 1
KNTC1P50748 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.3■■□□□ 1
KNTC1P50748 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.3■■□□□ 1
KNTC1P50748 AP004607.4-201ENST00000530158 1459 ntBASIC21.3■■□□□ 1
KNTC1P50748 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
KNTC1P50748 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.3■■□□□ 1
KNTC1P50748 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
KNTC1P50748 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KNTC1P50748 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KNTC1P50748 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.29■■□□□ 1
KNTC1P50748 AC104771.1-201ENST00000603335 964 ntBASIC21.29■■□□□ 1
KNTC1P50748 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.29■■□□□ 1
KNTC1P50748 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.29■■□□□ 1
KNTC1P50748 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.29■■□□□ 1
KNTC1P50748 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.29■■□□□ 1
KNTC1P50748 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.29■■□□□ 1
KNTC1P50748 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.29■■□□□ 1
KNTC1P50748 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KNTC1P50748 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KNTC1P50748 CROCCP5-201ENST00000436658 830 ntBASIC21.29■■□□□ 1
KNTC1P50748 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.29■■□□□ 1
KNTC1P50748 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.29■■□□□ 1
KNTC1P50748 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KNTC1P50748 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.28■■□□□ 1
KNTC1P50748 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
KNTC1P50748 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.28■■□□□ 1
KNTC1P50748 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KNTC1P50748 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.28■■□□□ 1
KNTC1P50748 GPX1P1-201ENST00000388829 606 ntBASIC21.28■■□□□ 1
KNTC1P50748 KRT18P11-201ENST00000435214 1283 ntBASIC21.28■■□□□ 1
KNTC1P50748 NCF1B-203ENST00000435988 1254 ntBASIC21.28■■□□□ 1
KNTC1P50748 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.28■■□□□ 1
KNTC1P50748 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.28■■□□□ 1
KNTC1P50748 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.28■■□□□ 1
KNTC1P50748 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.28■■□□□ 1
KNTC1P50748 AC073111.5-205ENST00000641717 521 ntBASIC21.28■■□□□ 1
KNTC1P50748 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
KNTC1P50748 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KNTC1P50748 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.27■■□□□ 1
KNTC1P50748 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KNTC1P50748 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.27■■□□□ 1
KNTC1P50748 OR2I1P-207ENST00000453522 948 ntBASIC21.27■■□□□ 1
KNTC1P50748 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
KNTC1P50748 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
KNTC1P50748 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
KNTC1P50748 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.27■■□□□ 1
KNTC1P50748 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
KNTC1P50748 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.27■■□□□ 1
KNTC1P50748 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
KNTC1P50748 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.27■□□□□ 0.99
KNTC1P50748 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.27■□□□□ 0.99
KNTC1P50748 HLA-L-211ENST00000482052 1765 ntBASIC21.26■□□□□ 0.99
KNTC1P50748 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
KNTC1P50748 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KNTC1P50748 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.26■□□□□ 0.99
KNTC1P50748 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
KNTC1P50748 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.26■□□□□ 0.99
KNTC1P50748 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KNTC1P50748 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
KNTC1P50748 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.26■□□□□ 0.99
KNTC1P50748 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KNTC1P50748 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.25■□□□□ 0.99
KNTC1P50748 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.25■□□□□ 0.99
KNTC1P50748 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.25■□□□□ 0.99
KNTC1P50748 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.25■□□□□ 0.99
KNTC1P50748 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.25■□□□□ 0.99
KNTC1P50748 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
KNTC1P50748 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.25■□□□□ 0.99
KNTC1P50748 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KNTC1P50748 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.25■□□□□ 0.99
KNTC1P50748 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.25■□□□□ 0.99
KNTC1P50748 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KNTC1P50748 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KNTC1P50748 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.24■□□□□ 0.99
KNTC1P50748 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KNTC1P50748 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.24■□□□□ 0.99
KNTC1P50748 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
KNTC1P50748 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KNTC1P50748 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
KNTC1P50748 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KNTC1P50748 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.23■□□□□ 0.99
KNTC1P50748 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.23■□□□□ 0.99
KNTC1P50748 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.23■□□□□ 0.99
KNTC1P50748 BX005040.4-201ENST00000637145 1518 ntBASIC21.23■□□□□ 0.99
KNTC1P50748 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.23■□□□□ 0.99
KNTC1P50748 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KNTC1P50748 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.23■□□□□ 0.99
KNTC1P50748 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.23■□□□□ 0.99
KNTC1P50748 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.23■□□□□ 0.99
KNTC1P50748 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.23■□□□□ 0.99
KNTC1P50748 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.23■□□□□ 0.99
KNTC1P50748 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KNTC1P50748 AC022211.4-201ENST00000625094 2161 ntBASIC21.23■□□□□ 0.99
KNTC1P50748 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms