Protein–RNA interactions for Protein: P47992

XCL1, Lymphotactin, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XCL1P47992 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
XCL1P47992 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
XCL1P47992 EP400NL-214ENST00000641289 2402 ntBASIC15.21■□□□□ 0.02
XCL1P47992 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
XCL1P47992 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
XCL1P47992 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
XCL1P47992 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC15.2■□□□□ 0.02
XCL1P47992 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC15.2■□□□□ 0.02
XCL1P47992 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
XCL1P47992 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
XCL1P47992 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
XCL1P47992 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
XCL1P47992 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC15.2■□□□□ 0.02
XCL1P47992 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
XCL1P47992 AC079630.1-202ENST00000618127 1840 ntBASIC15.2■□□□□ 0.02
XCL1P47992 STK25-234ENST00000535007 2459 ntTSL 2 BASIC15.2■□□□□ 0.02
XCL1P47992 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
XCL1P47992 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
XCL1P47992 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC15.2■□□□□ 0.02
XCL1P47992 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
XCL1P47992 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
XCL1P47992 AC004448.1-201ENST00000458332 883 ntBASIC15.2■□□□□ 0.02
XCL1P47992 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
XCL1P47992 AC012354.3-201ENST00000623734 483 ntBASIC15.2■□□□□ 0.02
XCL1P47992 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC15.2■□□□□ 0.02
XCL1P47992 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC15.2■□□□□ 0.02
XCL1P47992 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
XCL1P47992 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
XCL1P47992 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
XCL1P47992 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
XCL1P47992 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
XCL1P47992 KRT8P33-201ENST00000508125 1423 ntBASIC15.19■□□□□ 0.02
XCL1P47992 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
XCL1P47992 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
XCL1P47992 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
XCL1P47992 AL033527.3-201ENST00000566366 1196 ntBASIC15.19■□□□□ 0.02
XCL1P47992 LSM7-203ENST00000585409 512 ntTSL 2 BASIC15.19■□□□□ 0.02
XCL1P47992 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
XCL1P47992 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
XCL1P47992 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
XCL1P47992 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC15.19■□□□□ 0.02
XCL1P47992 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
XCL1P47992 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.18■□□□□ 0.02
XCL1P47992 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
XCL1P47992 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
XCL1P47992 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
XCL1P47992 YBX1P4-201ENST00000392794 808 ntBASIC15.18■□□□□ 0.02
XCL1P47992 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC15.18■□□□□ 0.02
XCL1P47992 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC15.18■□□□□ 0.02
XCL1P47992 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
XCL1P47992 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
XCL1P47992 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
XCL1P47992 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
XCL1P47992 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
XCL1P47992 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
XCL1P47992 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
XCL1P47992 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
XCL1P47992 GUSBP5-202ENST00000510805 1989 ntBASIC15.18■□□□□ 0.02
XCL1P47992 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
XCL1P47992 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
XCL1P47992 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC15.17■□□□□ 0.02
XCL1P47992 USF2-207ENST00000595068 1612 ntTSL 5 BASIC15.17■□□□□ 0.02
XCL1P47992 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
XCL1P47992 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
XCL1P47992 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
XCL1P47992 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
XCL1P47992 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC15.17■□□□□ 0.02
XCL1P47992 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC15.17■□□□□ 0.02
XCL1P47992 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC15.17■□□□□ 0.02
XCL1P47992 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC15.17■□□□□ 0.02
XCL1P47992 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC15.17■□□□□ 0.02
XCL1P47992 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC15.17■□□□□ 0.02
XCL1P47992 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
XCL1P47992 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
XCL1P47992 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC15.17■□□□□ 0.02
XCL1P47992 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
XCL1P47992 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
XCL1P47992 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC15.17■□□□□ 0.02
XCL1P47992 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
XCL1P47992 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
XCL1P47992 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC15.16■□□□□ 0.02
XCL1P47992 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
XCL1P47992 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
XCL1P47992 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
XCL1P47992 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
XCL1P47992 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC15.16■□□□□ 0.02
XCL1P47992 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
XCL1P47992 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
XCL1P47992 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
XCL1P47992 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC15.16■□□□□ 0.02
XCL1P47992 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC15.16■□□□□ 0.02
XCL1P47992 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
XCL1P47992 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
XCL1P47992 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
XCL1P47992 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
XCL1P47992 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
XCL1P47992 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
XCL1P47992 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
XCL1P47992 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
XCL1P47992 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms