Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CBX5P45973 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
CBX5P45973 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CBX5P45973 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CBX5P45973 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.05■□□□□ 0.64
CBX5P45973 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CBX5P45973 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CBX5P45973 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CBX5P45973 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CBX5P45973 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CBX5P45973 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.04■□□□□ 0.64
CBX5P45973 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
CBX5P45973 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CBX5P45973 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CBX5P45973 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.04■□□□□ 0.64
CBX5P45973 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.03■□□□□ 0.64
CBX5P45973 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX5P45973 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX5P45973 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX5P45973 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX5P45973 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX5P45973 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX5P45973 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CBX5P45973 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.03■□□□□ 0.64
CBX5P45973 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CBX5P45973 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX5P45973 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX5P45973 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX5P45973 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX5P45973 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX5P45973 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CBX5P45973 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CBX5P45973 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CBX5P45973 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.02■□□□□ 0.64
CBX5P45973 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CBX5P45973 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.02■□□□□ 0.64
CBX5P45973 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CBX5P45973 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CBX5P45973 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CBX5P45973 AC087393.1-201ENST00000582896 145 ntBASIC19.02■□□□□ 0.64
CBX5P45973 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
CBX5P45973 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.02■□□□□ 0.64
CBX5P45973 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CBX5P45973 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CBX5P45973 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CBX5P45973 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.02■□□□□ 0.63
CBX5P45973 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CBX5P45973 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CBX5P45973 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CBX5P45973 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
CBX5P45973 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CBX5P45973 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
CBX5P45973 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CBX5P45973 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
CBX5P45973 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CBX5P45973 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.01■□□□□ 0.63
CBX5P45973 AF106564.1-201ENST00000607058 2553 ntBASIC19.01■□□□□ 0.63
CBX5P45973 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBX5P45973 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBX5P45973 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBX5P45973 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CBX5P45973 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.01■□□□□ 0.63
CBX5P45973 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.01■□□□□ 0.63
CBX5P45973 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBX5P45973 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBX5P45973 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBX5P45973 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CBX5P45973 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBX5P45973 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBX5P45973 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBX5P45973 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CBX5P45973 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19■□□□□ 0.63
CBX5P45973 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CBX5P45973 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CBX5P45973 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CBX5P45973 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19■□□□□ 0.63
CBX5P45973 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CBX5P45973 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CBX5P45973 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CBX5P45973 GPX1-201ENST00000419349 1106 ntBASIC18.99■□□□□ 0.63
CBX5P45973 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CBX5P45973 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CBX5P45973 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CBX5P45973 AC011551.1-201ENST00000614101 683 ntBASIC18.99■□□□□ 0.63
CBX5P45973 MIR7108-201ENST00000614319 87 ntBASIC18.99■□□□□ 0.63
CBX5P45973 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CBX5P45973 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CBX5P45973 AC092667.1-201ENST00000434301 2586 ntBASIC18.99■□□□□ 0.63
CBX5P45973 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CBX5P45973 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CBX5P45973 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CBX5P45973 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.98■□□□□ 0.63
CBX5P45973 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CBX5P45973 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CBX5P45973 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CBX5P45973 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.98■□□□□ 0.63
CBX5P45973 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.98■□□□□ 0.63
CBX5P45973 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CBX5P45973 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CBX5P45973 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms