Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC12P31275 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC12P31275 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC12P31275 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.64■□□□□ 0.73
HOXC12P31275 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC12P31275 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
HOXC12P31275 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC12P31275 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC12P31275 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.63■□□□□ 0.73
HOXC12P31275 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.63■□□□□ 0.73
HOXC12P31275 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXC12P31275 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC12P31275 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXC12P31275 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC12P31275 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC12P31275 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC12P31275 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC12P31275 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC12P31275 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
HOXC12P31275 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC12P31275 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC12P31275 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC12P31275 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXC12P31275 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXC12P31275 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC12P31275 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC12P31275 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.61■□□□□ 0.73
HOXC12P31275 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.61■□□□□ 0.73
HOXC12P31275 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.61■□□□□ 0.73
HOXC12P31275 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HOXC12P31275 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
HOXC12P31275 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC12P31275 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC12P31275 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC12P31275 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.6■□□□□ 0.73
HOXC12P31275 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
HOXC12P31275 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.6■□□□□ 0.73
HOXC12P31275 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC12P31275 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.6■□□□□ 0.73
HOXC12P31275 AL138724.1-201ENST00000606771 1088 ntBASIC19.6■□□□□ 0.73
HOXC12P31275 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC12P31275 AC144652.1-201ENST00000609974 1624 ntBASIC19.6■□□□□ 0.73
HOXC12P31275 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.6■□□□□ 0.73
HOXC12P31275 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC12P31275 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HOXC12P31275 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC12P31275 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC12P31275 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC12P31275 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.59■□□□□ 0.73
HOXC12P31275 RASA4CP-201ENST00000424092 1398 ntBASIC19.59■□□□□ 0.73
HOXC12P31275 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC12P31275 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
HOXC12P31275 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC12P31275 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC12P31275 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC12P31275 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC12P31275 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
HOXC12P31275 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC12P31275 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC12P31275 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
HOXC12P31275 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HOXC12P31275 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
HOXC12P31275 FP325331.1-202ENST00000623531 1380 ntBASIC19.58■□□□□ 0.73
HOXC12P31275 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.58■□□□□ 0.73
HOXC12P31275 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HOXC12P31275 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HOXC12P31275 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HOXC12P31275 PKD1P6-201ENST00000343738 4769 ntBASIC19.58■□□□□ 0.73
HOXC12P31275 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HOXC12P31275 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HOXC12P31275 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HOXC12P31275 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HOXC12P31275 CA15P2-201ENST00000611168 834 ntBASIC19.58■□□□□ 0.72
HOXC12P31275 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HOXC12P31275 LINC01529-204ENST00000636474 1715 ntBASIC19.58■□□□□ 0.72
HOXC12P31275 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
HOXC12P31275 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
HOXC12P31275 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HOXC12P31275 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HOXC12P31275 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HOXC12P31275 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC12P31275 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC12P31275 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC12P31275 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC12P31275 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC12P31275 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
HOXC12P31275 MIR4767-201ENST00000582827 78 ntBASIC19.57■□□□□ 0.72
HOXC12P31275 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC12P31275 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.57■□□□□ 0.72
HOXC12P31275 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.57■□□□□ 0.72
HOXC12P31275 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC12P31275 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
HOXC12P31275 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC12P31275 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.56■□□□□ 0.72
HOXC12P31275 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC12P31275 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
HOXC12P31275 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC12P31275 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
HOXC12P31275 SERBP1P1-201ENST00000396021 1160 ntBASIC19.56■□□□□ 0.72
HOXC12P31275 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms