Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL8A2P25067 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL8A2P25067 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL8A2P25067 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.79■□□□□ 0.6
COL8A2P25067 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL8A2P25067 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL8A2P25067 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL8A2P25067 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL8A2P25067 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL8A2P25067 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.79■□□□□ 0.6
COL8A2P25067 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL8A2P25067 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
COL8A2P25067 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
COL8A2P25067 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
COL8A2P25067 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL8A2P25067 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL8A2P25067 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL8A2P25067 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL8A2P25067 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.78■□□□□ 0.6
COL8A2P25067 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.78■□□□□ 0.6
COL8A2P25067 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.78■□□□□ 0.6
COL8A2P25067 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL8A2P25067 AC126544.1-201ENST00000580842 1059 ntBASIC18.78■□□□□ 0.6
COL8A2P25067 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
COL8A2P25067 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL8A2P25067 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.78■□□□□ 0.6
COL8A2P25067 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL8A2P25067 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.78■□□□□ 0.6
COL8A2P25067 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL8A2P25067 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.78■□□□□ 0.6
COL8A2P25067 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL8A2P25067 AC133561.1-201ENST00000568600 2415 ntBASIC18.78■□□□□ 0.6
COL8A2P25067 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
COL8A2P25067 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL8A2P25067 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL8A2P25067 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.77■□□□□ 0.6
COL8A2P25067 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL8A2P25067 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.77■□□□□ 0.6
COL8A2P25067 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL8A2P25067 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
COL8A2P25067 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.77■□□□□ 0.6
COL8A2P25067 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.77■□□□□ 0.6
COL8A2P25067 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.77■□□□□ 0.6
COL8A2P25067 SLC47A1P1-202ENST00000449666 945 ntBASIC18.77■□□□□ 0.6
COL8A2P25067 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.77■□□□□ 0.6
COL8A2P25067 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL8A2P25067 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.77■□□□□ 0.6
COL8A2P25067 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
COL8A2P25067 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
COL8A2P25067 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
COL8A2P25067 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL8A2P25067 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL8A2P25067 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
COL8A2P25067 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.76■□□□□ 0.59
COL8A2P25067 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL8A2P25067 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL8A2P25067 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
COL8A2P25067 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL8A2P25067 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL8A2P25067 RARRES2P6-201ENST00000567333 442 ntBASIC18.76■□□□□ 0.59
COL8A2P25067 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.76■□□□□ 0.59
COL8A2P25067 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.76■□□□□ 0.59
COL8A2P25067 AC079630.1-202ENST00000618127 1840 ntBASIC18.76■□□□□ 0.59
COL8A2P25067 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
COL8A2P25067 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL8A2P25067 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.76■□□□□ 0.59
COL8A2P25067 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL8A2P25067 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL8A2P25067 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL8A2P25067 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.75■□□□□ 0.59
COL8A2P25067 IRS3P-201ENST00000223076 1006 ntBASIC18.75■□□□□ 0.59
COL8A2P25067 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL8A2P25067 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL8A2P25067 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL8A2P25067 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.75■□□□□ 0.59
COL8A2P25067 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.75■□□□□ 0.59
COL8A2P25067 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.75■□□□□ 0.59
COL8A2P25067 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.75■□□□□ 0.59
COL8A2P25067 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
COL8A2P25067 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL8A2P25067 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
COL8A2P25067 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL8A2P25067 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL8A2P25067 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL8A2P25067 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.74■□□□□ 0.59
COL8A2P25067 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL8A2P25067 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL8A2P25067 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL8A2P25067 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL8A2P25067 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.74■□□□□ 0.59
COL8A2P25067 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.74■□□□□ 0.59
COL8A2P25067 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.74■□□□□ 0.59
COL8A2P25067 AC010525.1-201ENST00000585559 441 ntBASIC18.74■□□□□ 0.59
COL8A2P25067 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL8A2P25067 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.74■□□□□ 0.59
COL8A2P25067 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
COL8A2P25067 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
COL8A2P25067 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.73■□□□□ 0.59
COL8A2P25067 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL8A2P25067 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms