Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.5■□□□□ 0.87
NR4A1P22736 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
NR4A1P22736 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NR4A1P22736 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NR4A1P22736 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.5■□□□□ 0.87
NR4A1P22736 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NR4A1P22736 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
NR4A1P22736 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.49■□□□□ 0.87
NR4A1P22736 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.49■□□□□ 0.87
NR4A1P22736 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
NR4A1P22736 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NR4A1P22736 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.49■□□□□ 0.87
NR4A1P22736 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NR4A1P22736 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NR4A1P22736 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.49■□□□□ 0.87
NR4A1P22736 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
NR4A1P22736 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.49■□□□□ 0.87
NR4A1P22736 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NR4A1P22736 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NR4A1P22736 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NR4A1P22736 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NR4A1P22736 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NR4A1P22736 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
NR4A1P22736 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
NR4A1P22736 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
NR4A1P22736 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NR4A1P22736 AC022616.5-201ENST00000518796 181 ntBASIC20.48■□□□□ 0.87
NR4A1P22736 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
NR4A1P22736 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NR4A1P22736 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.48■□□□□ 0.87
NR4A1P22736 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
NR4A1P22736 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.48■□□□□ 0.87
NR4A1P22736 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
NR4A1P22736 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NR4A1P22736 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
NR4A1P22736 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NR4A1P22736 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NR4A1P22736 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NR4A1P22736 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NR4A1P22736 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NR4A1P22736 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
NR4A1P22736 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.47■□□□□ 0.87
NR4A1P22736 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NR4A1P22736 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NR4A1P22736 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.46■□□□□ 0.87
NR4A1P22736 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NR4A1P22736 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NR4A1P22736 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
NR4A1P22736 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NR4A1P22736 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NR4A1P22736 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
NR4A1P22736 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
NR4A1P22736 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NR4A1P22736 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.46■□□□□ 0.87
NR4A1P22736 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.46■□□□□ 0.87
NR4A1P22736 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
NR4A1P22736 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NR4A1P22736 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
NR4A1P22736 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.45■□□□□ 0.86
NR4A1P22736 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NR4A1P22736 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NR4A1P22736 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NR4A1P22736 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NR4A1P22736 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NR4A1P22736 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.45■□□□□ 0.86
NR4A1P22736 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NR4A1P22736 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NR4A1P22736 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
NR4A1P22736 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
NR4A1P22736 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.44■□□□□ 0.86
NR4A1P22736 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
NR4A1P22736 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.44■□□□□ 0.86
NR4A1P22736 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NR4A1P22736 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.44■□□□□ 0.86
NR4A1P22736 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NR4A1P22736 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.44■□□□□ 0.86
NR4A1P22736 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NR4A1P22736 AC242852.2-201ENST00000615738 1807 ntBASIC20.43■□□□□ 0.86
NR4A1P22736 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
NR4A1P22736 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NR4A1P22736 AL592295.1-201ENST00000400984 884 ntBASIC20.43■□□□□ 0.86
NR4A1P22736 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.43■□□□□ 0.86
NR4A1P22736 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
NR4A1P22736 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NR4A1P22736 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.43■□□□□ 0.86
NR4A1P22736 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
NR4A1P22736 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NR4A1P22736 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.43■□□□□ 0.86
NR4A1P22736 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.42■□□□□ 0.86
NR4A1P22736 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NR4A1P22736 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.42■□□□□ 0.86
NR4A1P22736 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NR4A1P22736 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NR4A1P22736 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.42■□□□□ 0.86
NR4A1P22736 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NR4A1P22736 AC073130.3-201ENST00000624389 2278 ntBASIC20.42■□□□□ 0.86
NR4A1P22736 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NR4A1P22736 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.41■□□□□ 0.86
NR4A1P22736 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
NR4A1P22736 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms