Protein–RNA interactions for Protein: P21580

TNFAIP3, Tumor necrosis factor alpha-induced protein 3, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3P21580 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TNFAIP3P21580 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.77■■□□□ 1.4
TNFAIP3P21580 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TNFAIP3P21580 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.76■■□□□ 1.39
TNFAIP3P21580 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.76■■□□□ 1.39
TNFAIP3P21580 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
TNFAIP3P21580 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.76■■□□□ 1.39
TNFAIP3P21580 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
TNFAIP3P21580 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
TNFAIP3P21580 MTDHP2-201ENST00000601468 714 ntBASIC23.76■■□□□ 1.39
TNFAIP3P21580 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TNFAIP3P21580 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TNFAIP3P21580 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TNFAIP3P21580 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TNFAIP3P21580 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TNFAIP3P21580 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TNFAIP3P21580 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.76■■□□□ 1.39
TNFAIP3P21580 FP325331.1-202ENST00000623531 1380 ntBASIC23.76■■□□□ 1.39
TNFAIP3P21580 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TNFAIP3P21580 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TNFAIP3P21580 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TNFAIP3P21580 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TNFAIP3P21580 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TNFAIP3P21580 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.75■■□□□ 1.39
TNFAIP3P21580 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
TNFAIP3P21580 LINC01529-204ENST00000636474 1715 ntBASIC23.75■■□□□ 1.39
TNFAIP3P21580 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TNFAIP3P21580 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
TNFAIP3P21580 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TNFAIP3P21580 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.74■■□□□ 1.39
TNFAIP3P21580 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.74■■□□□ 1.39
TNFAIP3P21580 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TNFAIP3P21580 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
TNFAIP3P21580 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
TNFAIP3P21580 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.74■■□□□ 1.39
TNFAIP3P21580 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
TNFAIP3P21580 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
TNFAIP3P21580 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
TNFAIP3P21580 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
TNFAIP3P21580 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
TNFAIP3P21580 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TNFAIP3P21580 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.73■■□□□ 1.39
TNFAIP3P21580 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TNFAIP3P21580 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TNFAIP3P21580 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TNFAIP3P21580 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.73■■□□□ 1.39
TNFAIP3P21580 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.73■■□□□ 1.39
TNFAIP3P21580 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.73■■□□□ 1.39
TNFAIP3P21580 AC009299.2-201ENST00000482477 511 ntBASIC23.73■■□□□ 1.39
TNFAIP3P21580 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
TNFAIP3P21580 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
TNFAIP3P21580 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TNFAIP3P21580 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TNFAIP3P21580 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
TNFAIP3P21580 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
TNFAIP3P21580 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
TNFAIP3P21580 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.72■■□□□ 1.39
TNFAIP3P21580 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TNFAIP3P21580 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TNFAIP3P21580 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.71■■□□□ 1.39
TNFAIP3P21580 ECEL1P1-201ENST00000373592 1742 ntBASIC23.71■■□□□ 1.39
TNFAIP3P21580 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
TNFAIP3P21580 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.71■■□□□ 1.39
TNFAIP3P21580 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.71■■□□□ 1.39
TNFAIP3P21580 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TNFAIP3P21580 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.71■■□□□ 1.39
TNFAIP3P21580 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
TNFAIP3P21580 AC010997.5-201ENST00000609182 354 ntBASIC23.71■■□□□ 1.39
TNFAIP3P21580 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TNFAIP3P21580 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
TNFAIP3P21580 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.71■■□□□ 1.39
TNFAIP3P21580 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TNFAIP3P21580 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.7■■□□□ 1.39
TNFAIP3P21580 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TNFAIP3P21580 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TNFAIP3P21580 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
TNFAIP3P21580 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TNFAIP3P21580 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.7■■□□□ 1.38
TNFAIP3P21580 TSPY9P-201ENST00000440215 945 ntBASIC23.7■■□□□ 1.38
TNFAIP3P21580 TSPY11P-201ENST00000442607 1045 ntBASIC23.7■■□□□ 1.38
TNFAIP3P21580 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.7■■□□□ 1.38
TNFAIP3P21580 AL451085.2-201ENST00000605085 799 ntBASIC23.7■■□□□ 1.38
TNFAIP3P21580 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.7■■□□□ 1.38
TNFAIP3P21580 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.7■■□□□ 1.38
TNFAIP3P21580 LINC00526-201ENST00000581067 1875 ntBASIC23.7■■□□□ 1.38
TNFAIP3P21580 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.7■■□□□ 1.38
TNFAIP3P21580 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TNFAIP3P21580 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TNFAIP3P21580 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TNFAIP3P21580 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TNFAIP3P21580 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.69■■□□□ 1.38
TNFAIP3P21580 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.69■■□□□ 1.38
TNFAIP3P21580 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TNFAIP3P21580 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
TNFAIP3P21580 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TNFAIP3P21580 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TNFAIP3P21580 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.69■■□□□ 1.38
TNFAIP3P21580 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
TNFAIP3P21580 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
TNFAIP3P21580 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms