Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NF1P21359 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NF1P21359 AC006058.3-201ENST00000606217 1069 ntBASIC18.31■□□□□ 0.52
NF1P21359 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NF1P21359 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NF1P21359 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NF1P21359 KRT18P11-201ENST00000435214 1283 ntBASIC18.31■□□□□ 0.52
NF1P21359 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NF1P21359 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
NF1P21359 AL121832.2-201ENST00000610979 668 ntBASIC18.31■□□□□ 0.52
NF1P21359 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.31■□□□□ 0.52
NF1P21359 AC131274.2-201ENST00000580697 1507 ntBASIC18.3■□□□□ 0.52
NF1P21359 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
NF1P21359 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NF1P21359 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.3■□□□□ 0.52
NF1P21359 KRT19P1-201ENST00000405746 1186 ntBASIC18.3■□□□□ 0.52
NF1P21359 AL445228.2-201ENST00000605589 952 ntBASIC18.3■□□□□ 0.52
NF1P21359 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NF1P21359 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
NF1P21359 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NF1P21359 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NF1P21359 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.3■□□□□ 0.52
NF1P21359 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.3■□□□□ 0.52
NF1P21359 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
NF1P21359 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NF1P21359 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
NF1P21359 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NF1P21359 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NF1P21359 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
NF1P21359 UNC93B4-201ENST00000505679 747 ntBASIC18.29■□□□□ 0.52
NF1P21359 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.29■□□□□ 0.52
NF1P21359 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.29■□□□□ 0.52
NF1P21359 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NF1P21359 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
NF1P21359 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
NF1P21359 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NF1P21359 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.29■□□□□ 0.52
NF1P21359 SLC7A5P1-201ENST00000568957 537 ntBASIC18.29■□□□□ 0.52
NF1P21359 AC073912.3-201ENST00000624414 853 ntBASIC18.29■□□□□ 0.52
NF1P21359 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.29■□□□□ 0.52
NF1P21359 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
NF1P21359 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
NF1P21359 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NF1P21359 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NF1P21359 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.28■□□□□ 0.52
NF1P21359 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NF1P21359 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NF1P21359 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NF1P21359 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NF1P21359 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.28■□□□□ 0.52
NF1P21359 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.28■□□□□ 0.52
NF1P21359 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.28■□□□□ 0.52
NF1P21359 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
NF1P21359 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.28■□□□□ 0.52
NF1P21359 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NF1P21359 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
NF1P21359 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NF1P21359 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NF1P21359 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NF1P21359 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NF1P21359 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.27■□□□□ 0.52
NF1P21359 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NF1P21359 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NF1P21359 AL158047.1-201ENST00000445918 881 ntBASIC18.27■□□□□ 0.52
NF1P21359 AC008550.1-201ENST00000511500 884 ntBASIC18.27■□□□□ 0.52
NF1P21359 pRNA.6-201ENST00000610482 90 ntBASIC18.27■□□□□ 0.52
NF1P21359 pRNA.5-201ENST00000612139 90 ntBASIC18.27■□□□□ 0.52
NF1P21359 pRNA.11-201ENST00000618423 90 ntBASIC18.27■□□□□ 0.52
NF1P21359 pRNA.13-201ENST00000619112 90 ntBASIC18.27■□□□□ 0.52
NF1P21359 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NF1P21359 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NF1P21359 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.27■□□□□ 0.51
NF1P21359 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NF1P21359 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
NF1P21359 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NF1P21359 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.26■□□□□ 0.51
NF1P21359 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NF1P21359 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
NF1P21359 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.26■□□□□ 0.51
NF1P21359 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NF1P21359 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.26■□□□□ 0.51
NF1P21359 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.26■□□□□ 0.51
NF1P21359 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.26■□□□□ 0.51
NF1P21359 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NF1P21359 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NF1P21359 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NF1P21359 SLC6A10P-202ENST00000431994 2058 ntBASIC18.25■□□□□ 0.51
NF1P21359 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
NF1P21359 AC007322.1-201ENST00000426983 750 ntBASIC18.25■□□□□ 0.51
NF1P21359 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
NF1P21359 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NF1P21359 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NF1P21359 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NF1P21359 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
NF1P21359 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.25■□□□□ 0.51
NF1P21359 DUX4L4-201ENST00000566884 1269 ntBASIC18.25■□□□□ 0.51
NF1P21359 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
NF1P21359 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NF1P21359 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NF1P21359 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms