Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
ERCC3P19447 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC25.71■■□□□ 1.71
ERCC3P19447 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC25.71■■□□□ 1.71
ERCC3P19447 AC010525.1-201ENST00000585559 441 ntBASIC25.71■■□□□ 1.71
ERCC3P19447 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC25.71■■□□□ 1.71
ERCC3P19447 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
ERCC3P19447 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC25.7■■□□□ 1.71
ERCC3P19447 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.7■■□□□ 1.71
ERCC3P19447 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ERCC3P19447 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.7■■□□□ 1.7
ERCC3P19447 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.7■■□□□ 1.7
ERCC3P19447 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC25.7■■□□□ 1.7
ERCC3P19447 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ERCC3P19447 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
ERCC3P19447 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
ERCC3P19447 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
ERCC3P19447 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
ERCC3P19447 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ERCC3P19447 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ERCC3P19447 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC25.69■■□□□ 1.7
ERCC3P19447 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
ERCC3P19447 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ERCC3P19447 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC25.69■■□□□ 1.7
ERCC3P19447 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ERCC3P19447 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC25.69■■□□□ 1.7
ERCC3P19447 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC25.69■■□□□ 1.7
ERCC3P19447 AC123595.1-201ENST00000440769 1046 ntBASIC25.69■■□□□ 1.7
ERCC3P19447 AC012414.1-201ENST00000556676 535 ntBASIC25.69■■□□□ 1.7
ERCC3P19447 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC25.69■■□□□ 1.7
ERCC3P19447 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC25.69■■□□□ 1.7
ERCC3P19447 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
ERCC3P19447 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ERCC3P19447 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ERCC3P19447 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ERCC3P19447 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.68■■□□□ 1.7
ERCC3P19447 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ERCC3P19447 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ERCC3P19447 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC25.68■■□□□ 1.7
ERCC3P19447 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ERCC3P19447 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC25.68■■□□□ 1.7
ERCC3P19447 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC25.68■■□□□ 1.7
ERCC3P19447 RARRES2P11-201ENST00000635158 484 ntBASIC25.68■■□□□ 1.7
ERCC3P19447 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
ERCC3P19447 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
ERCC3P19447 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ERCC3P19447 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC25.68■■□□□ 1.7
ERCC3P19447 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ERCC3P19447 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ERCC3P19447 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC25.68■■□□□ 1.7
ERCC3P19447 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC25.67■■□□□ 1.7
ERCC3P19447 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC25.67■■□□□ 1.7
ERCC3P19447 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
ERCC3P19447 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC25.67■■□□□ 1.7
ERCC3P19447 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ERCC3P19447 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC25.67■■□□□ 1.7
ERCC3P19447 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ERCC3P19447 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ERCC3P19447 FP325331.1-202ENST00000623531 1380 ntBASIC25.67■■□□□ 1.7
ERCC3P19447 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC25.67■■□□□ 1.7
ERCC3P19447 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
ERCC3P19447 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
ERCC3P19447 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ERCC3P19447 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC25.66■■□□□ 1.7
ERCC3P19447 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
ERCC3P19447 AC090192.1-201ENST00000517740 490 ntBASIC25.66■■□□□ 1.7
ERCC3P19447 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC25.66■■□□□ 1.7
ERCC3P19447 DUX4L4-201ENST00000566884 1269 ntBASIC25.66■■□□□ 1.7
ERCC3P19447 AL354811.1-201ENST00000610286 706 ntBASIC25.66■■□□□ 1.7
ERCC3P19447 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.66■■□□□ 1.7
ERCC3P19447 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC25.66■■□□□ 1.7
ERCC3P19447 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ERCC3P19447 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ERCC3P19447 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.66■■□□□ 1.7
ERCC3P19447 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
ERCC3P19447 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
ERCC3P19447 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC25.65■■□□□ 1.7
ERCC3P19447 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ERCC3P19447 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
ERCC3P19447 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC25.65■■□□□ 1.7
ERCC3P19447 OR2I1P-207ENST00000453522 948 ntBASIC25.65■■□□□ 1.7
ERCC3P19447 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC25.65■■□□□ 1.7
ERCC3P19447 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
ERCC3P19447 AC092437.1-201ENST00000624794 1048 ntBASIC25.65■■□□□ 1.7
ERCC3P19447 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
ERCC3P19447 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ERCC3P19447 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.65■■□□□ 1.7
ERCC3P19447 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.65■■□□□ 1.7
ERCC3P19447 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ERCC3P19447 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
ERCC3P19447 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.64■■□□□ 1.7
ERCC3P19447 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
ERCC3P19447 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
ERCC3P19447 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
ERCC3P19447 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.7
ERCC3P19447 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
ERCC3P19447 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC25.64■■□□□ 1.7
ERCC3P19447 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
ERCC3P19447 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC25.64■■□□□ 1.7
ERCC3P19447 AL137784.2-201ENST00000607332 1000 ntBASIC25.64■■□□□ 1.7
ERCC3P19447 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC25.64■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms