Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.48■□□□□ 0.55
ACANP16112 DUX4L4-201ENST00000566884 1269 ntBASIC18.48■□□□□ 0.55
ACANP16112 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ACANP16112 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ACANP16112 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ACANP16112 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ACANP16112 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.47■□□□□ 0.55
ACANP16112 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ACANP16112 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.47■□□□□ 0.55
ACANP16112 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ACANP16112 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ACANP16112 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ACANP16112 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.47■□□□□ 0.55
ACANP16112 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
ACANP16112 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
ACANP16112 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ACANP16112 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
ACANP16112 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.46■□□□□ 0.55
ACANP16112 POU5F1P3-201ENST00000428824 1078 ntBASIC18.46■□□□□ 0.55
ACANP16112 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.46■□□□□ 0.55
ACANP16112 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.46■□□□□ 0.55
ACANP16112 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.46■□□□□ 0.55
ACANP16112 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ACANP16112 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ACANP16112 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
ACANP16112 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.45■□□□□ 0.54
ACANP16112 TSPY6P-201ENST00000448518 926 ntBASIC18.45■□□□□ 0.54
ACANP16112 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.45■□□□□ 0.54
ACANP16112 AC105233.4-201ENST00000642045 216 ntBASIC18.45■□□□□ 0.54
ACANP16112 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.45■□□□□ 0.54
ACANP16112 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ACANP16112 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ACANP16112 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.45■□□□□ 0.54
ACANP16112 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
ACANP16112 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
ACANP16112 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.45■□□□□ 0.54
ACANP16112 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
ACANP16112 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ACANP16112 AF201337.1-201ENST00000520239 748 ntBASIC18.44■□□□□ 0.54
ACANP16112 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.44■□□□□ 0.54
ACANP16112 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ACANP16112 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
ACANP16112 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ACANP16112 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ACANP16112 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ACANP16112 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
ACANP16112 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ACANP16112 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.44■□□□□ 0.54
ACANP16112 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.44■□□□□ 0.54
ACANP16112 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ACANP16112 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ACANP16112 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ACANP16112 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ACANP16112 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.43■□□□□ 0.54
ACANP16112 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ACANP16112 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.43■□□□□ 0.54
ACANP16112 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ACANP16112 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ACANP16112 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ACANP16112 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
ACANP16112 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ACANP16112 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
ACANP16112 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ACANP16112 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
ACANP16112 DUX4L16-201ENST00000555130 1264 ntBASIC18.43■□□□□ 0.54
ACANP16112 ITM2C-210ENST00000620962 501 ntBASIC18.43■□□□□ 0.54
ACANP16112 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.43■□□□□ 0.54
ACANP16112 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ACANP16112 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ACANP16112 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ACANP16112 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ACANP16112 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ACANP16112 BX005040.4-201ENST00000637145 1518 ntBASIC18.42■□□□□ 0.54
ACANP16112 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
ACANP16112 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.42■□□□□ 0.54
ACANP16112 OR2I1P-207ENST00000453522 948 ntBASIC18.42■□□□□ 0.54
ACANP16112 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.42■□□□□ 0.54
ACANP16112 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.42■□□□□ 0.54
ACANP16112 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ACANP16112 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.41■□□□□ 0.54
ACANP16112 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ACANP16112 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.41■□□□□ 0.54
ACANP16112 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ACANP16112 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
ACANP16112 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ACANP16112 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ACANP16112 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ACANP16112 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ACANP16112 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.4■□□□□ 0.54
ACANP16112 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ACANP16112 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ACANP16112 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.4■□□□□ 0.54
ACANP16112 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ACANP16112 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.4■□□□□ 0.54
ACANP16112 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ACANP16112 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.4■□□□□ 0.54
ACANP16112 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.4■□□□□ 0.54
ACANP16112 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ACANP16112 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ACANP16112 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms