Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 BRAF-205ENST00000497784 2336 ntTSL 59.02□□□□□ -0.971e-5■■■□□ 14.9
XRCC6P12956 PDCD6-205ENST00000507473 486 ntTSL 38.9□□□□□ -0.981e-5■■■□□ 14.9
XRCC6P12956 RPS10-NUDT3-201ENST00000605528 595 ntTSL 57.64□□□□□ -1.191e-5■■■□□ 14.9
XRCC6P12956 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.08□□□□□ -1.281e-5■■■□□ 14.9
XRCC6P12956 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.321e-5■■■□□ 14.9
XRCC6P12956 KMT2C-203ENST00000360104 11186 ntTSL 1 (best)5.86□□□□□ -1.471e-5■■■□□ 14.9
XRCC6P12956 ELOVL6-203ENST00000503885 458 ntTSL 45.43□□□□□ -1.541e-5■■■□□ 14.9
XRCC6P12956 ELOVL6-208ENST00000514184 607 ntTSL 34.46□□□□□ -1.71e-5■■■□□ 14.9
XRCC6P12956 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.121e-8■■■□□ 14.9
XRCC6P12956 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.121e-8■■■□□ 14.9
XRCC6P12956 RRP1-202ENST00000471909 2544 ntTSL 1 (best)21.41■■□□□ 1.021e-19■■■□□ 14.9
XRCC6P12956 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.641e-19■■■□□ 14.9
XRCC6P12956 RRP1-201ENST00000467112 3019 ntTSL 1 (best)18.86■□□□□ 0.611e-19■■■□□ 14.9
XRCC6P12956 FLVCR2-201ENST00000238667 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.13e-23■■■□□ 14.9
XRCC6P12956 FLVCR2-205ENST00000554496 441 ntTSL 313.53□□□□□ -0.243e-23■■■□□ 14.9
XRCC6P12956 FLVCR2-209ENST00000555385 218 ntTSL 410.9□□□□□ -0.663e-23■■■□□ 14.9
XRCC6P12956 RNA5SP387-201ENST00000364226 106 ntBASIC3.5□□□□□ -1.853e-23■■■□□ 14.9
XRCC6P12956 RPS5-207ENST00000599232 1747 nt19.56■□□□□ 0.721e-12■■■□□ 14.8
XRCC6P12956 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.633e-7■■■□□ 14.8
XRCC6P12956 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.026e-8■■■□□ 14.8
XRCC6P12956 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.7□□□□□ -1.186e-8■■■□□ 14.8
XRCC6P12956 AKT2-203ENST00000391844 1795 ntTSL 1 (best)27.2■■□□□ 1.957e-7■■■□□ 14.7
XRCC6P12956 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC26.85■■□□□ 1.897e-7■■■□□ 14.7
XRCC6P12956 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC24.67■■□□□ 1.547e-7■■■□□ 14.7
XRCC6P12956 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.517e-7■■■□□ 14.7
XRCC6P12956 AKT2-240ENST00000584288 1706 ntTSL 222.58■■□□□ 1.217e-7■■■□□ 14.7
XRCC6P12956 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.097e-7■■■□□ 14.7
XRCC6P12956 AKT2-228ENST00000537834 1402 ntTSL 220.49■□□□□ 0.877e-7■■■□□ 14.7
XRCC6P12956 AKT2-232ENST00000578615 877 ntTSL 519.09■□□□□ 0.657e-7■■■□□ 14.7
XRCC6P12956 AKT2-221ENST00000487537 954 ntTSL 218.11■□□□□ 0.497e-7■■■□□ 14.7
XRCC6P12956 AKT2-212ENST00000441941 974 ntTSL 417.47■□□□□ 0.397e-7■■■□□ 14.7
XRCC6P12956 AKT2-216ENST00000476266 3309 ntTSL 516.21■□□□□ 0.187e-7■■■□□ 14.7
XRCC6P12956 AKT2-205ENST00000392037 681 ntTSL 216.09■□□□□ 0.177e-7■■■□□ 14.7
XRCC6P12956 AKT2-207ENST00000416362 974 ntTSL 515.49■□□□□ 0.077e-7■■■□□ 14.7
XRCC6P12956 AKT2-233ENST00000578975 3337 nt15.32■□□□□ 0.047e-7■■■□□ 14.7
XRCC6P12956 AKT2-201ENST00000311278 1393 ntTSL 1 (best) BASIC13.96□□□□□ -0.177e-7■■■□□ 14.7
XRCC6P12956 AKT2-213ENST00000452077 577 ntTSL 313.16□□□□□ -0.37e-7■■■□□ 14.7
XRCC6P12956 FANCA-207ENST00000561667 528 ntTSL 412.82□□□□□ -0.367e-7■■■□□ 14.7
XRCC6P12956 AKT2-224ENST00000492463 737 ntTSL 512.73□□□□□ -0.377e-7■■■□□ 14.7
XRCC6P12956 SLC22A4-203ENST00000491257 564 ntTSL 412.41□□□□□ -0.427e-7■■■□□ 14.7
XRCC6P12956 AKT2-229ENST00000578123 564 ntTSL 412□□□□□ -0.497e-7■■■□□ 14.7
XRCC6P12956 AKT2-242ENST00000601166 554 ntTSL 511.18□□□□□ -0.627e-7■■■□□ 14.7
XRCC6P12956 AKT2-223ENST00000491778 573 ntTSL 411.12□□□□□ -0.637e-7■■■□□ 14.7
XRCC6P12956 AKT2-219ENST00000486368 606 ntTSL 410.83□□□□□ -0.687e-7■■■□□ 14.7
XRCC6P12956 AKT2-241ENST00000596634 583 ntTSL 510.67□□□□□ -0.77e-7■■■□□ 14.7
XRCC6P12956 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC8.73□□□□□ -1.017e-7■■■□□ 14.7
XRCC6P12956 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.157e-7■■■□□ 14.7
XRCC6P12956 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.247e-7■■■□□ 14.7
XRCC6P12956 RPL23A-205ENST00000472628 639 ntTSL 1 (best) BASIC12.35□□□□□ -0.432e-19■■■□□ 14.6
XRCC6P12956 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.074e-7■■■□□ 14.6
XRCC6P12956 SLC35F5-202ENST00000409106 3120 ntTSL 221.15■□□□□ 0.984e-7■■■□□ 14.6
XRCC6P12956 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC7.12□□□□□ -1.274e-7■■■□□ 14.6
XRCC6P12956 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.29□□□□□ -1.564e-7■■■□□ 14.6
XRCC6P12956 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.163e-6■■■□□ 14.6
XRCC6P12956 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.973e-6■■■□□ 14.6
XRCC6P12956 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC19.54■□□□□ 0.723e-6■■■□□ 14.6
XRCC6P12956 SLC22A23-212ENST00000497691 2555 ntTSL 1 (best)18.65■□□□□ 0.583e-6■■■□□ 14.6
XRCC6P12956 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC17.68■□□□□ 0.423e-6■■■□□ 14.6
XRCC6P12956 SLC22A23-207ENST00000467177 1221 ntTSL 1 (best)15.92■□□□□ 0.143e-6■■■□□ 14.6
XRCC6P12956 SLC22A23-209ENST00000485307 1574 ntTSL 1 (best)15.38■□□□□ 0.053e-6■■■□□ 14.6
XRCC6P12956 SLC22A23-206ENST00000467144 542 ntTSL 414.95□□□□□ -0.023e-6■■■□□ 14.6
XRCC6P12956 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.69■□□□□ 0.262e-19■■■□□ 14.6
XRCC6P12956 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.082e-19■■■□□ 14.6
XRCC6P12956 RPL23A-202ENST00000394935 580 ntTSL 310.97□□□□□ -0.652e-19■■■□□ 14.6
XRCC6P12956 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC8.72□□□□□ -1.012e-19■■■□□ 14.6
XRCC6P12956 RPL23A-201ENST00000355731 587 ntTSL 56.94□□□□□ -1.32e-19■■■□□ 14.6
XRCC6P12956 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.66■■■□□ 2.188e-8■■■□□ 14.6
XRCC6P12956 ANKRD17-210ENST00000561029 2717 ntTSL 527.73■■■□□ 2.038e-8■■■□□ 14.6
XRCC6P12956 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.89■■□□□ 1.418e-8■■■□□ 14.6
XRCC6P12956 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC23.55■■□□□ 1.368e-8■■■□□ 14.6
XRCC6P12956 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC22.53■■□□□ 1.28e-8■■■□□ 14.6
XRCC6P12956 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.178e-8■■■□□ 14.6
XRCC6P12956 DDX55-207ENST00000540763 799 ntTSL 321.75■■□□□ 1.078e-8■■■□□ 14.6
XRCC6P12956 SNX14-217ENST00000514419 863 ntTSL 321.53■■□□□ 1.048e-8■■■□□ 14.6
XRCC6P12956 DDX55-211ENST00000544429 574 ntTSL 421.4■■□□□ 1.028e-8■■■□□ 14.6
XRCC6P12956 DDX55-204ENST00000536079 765 ntTSL 219.94■□□□□ 0.788e-8■■■□□ 14.6
XRCC6P12956 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.748e-8■■■□□ 14.6
XRCC6P12956 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC19.11■□□□□ 0.658e-8■■■□□ 14.6
XRCC6P12956 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.658e-8■■■□□ 14.6
XRCC6P12956 SNX14-204ENST00000369635 2578 ntTSL 518.98■□□□□ 0.638e-8■■■□□ 14.6
XRCC6P12956 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.588e-8■■■□□ 14.6
XRCC6P12956 DDX55-209ENST00000542286 2767 ntTSL 218.26■□□□□ 0.518e-8■■■□□ 14.6
XRCC6P12956 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC18.24■□□□□ 0.518e-8■■■□□ 14.6
XRCC6P12956 DDX55-212ENST00000544738 956 ntTSL 518.02■□□□□ 0.488e-8■■■□□ 14.6
XRCC6P12956 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.438e-8■■■□□ 14.6
XRCC6P12956 DDX55-202ENST00000354291 1004 ntTSL 517.35■□□□□ 0.378e-8■■■□□ 14.6
XRCC6P12956 USP36-221ENST00000592231 2479 ntTSL 217.15■□□□□ 0.348e-8■■■□□ 14.6
XRCC6P12956 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.328e-8■■■□□ 14.6
XRCC6P12956 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC16.67■□□□□ 0.268e-8■■■□□ 14.6
XRCC6P12956 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.218e-8■■■□□ 14.6
XRCC6P12956 USP36-214ENST00000589225 5885 ntTSL 1 (best)16.19■□□□□ 0.188e-8■■■□□ 14.6
XRCC6P12956 SNX14-214ENST00000509338 505 ntTSL 316.09■□□□□ 0.178e-8■■■□□ 14.6
XRCC6P12956 USP36-207ENST00000587010 607 ntTSL 315.8■□□□□ 0.128e-8■■■□□ 14.6
XRCC6P12956 IFT122-224ENST00000512157 734 ntTSL 514.88□□□□□ -0.038e-8■■■□□ 14.6
XRCC6P12956 DDX55-213ENST00000545042 450 ntTSL 514.8□□□□□ -0.048e-8■■■□□ 14.6
XRCC6P12956 IFT122-232ENST00000515783 962 ntTSL 514.14□□□□□ -0.158e-8■■■□□ 14.6
XRCC6P12956 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.178e-8■■■□□ 14.6
XRCC6P12956 IFT122-213ENST00000506507 4532 ntTSL 513.93□□□□□ -0.188e-8■■■□□ 14.6
XRCC6P12956 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.258e-8■■■□□ 14.6
XRCC6P12956 IFT122-215ENST00000507564 3824 ntTSL 1 (best) BASIC13.38□□□□□ -0.278e-8■■■□□ 14.6
Retrieved 100 of 6,788 protein–RNA pairs in 49.1 ms