Protein–RNA interactions for Protein: P0CG21

NHLRC4, NHL-repeat-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC4P0CG21 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC16.33■□□□□ 0.21
NHLRC4P0CG21 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
NHLRC4P0CG21 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NHLRC4P0CG21 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NHLRC4P0CG21 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC16.33■□□□□ 0.21
NHLRC4P0CG21 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC16.33■□□□□ 0.2
NHLRC4P0CG21 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.33■□□□□ 0.2
NHLRC4P0CG21 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NHLRC4P0CG21 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.33■□□□□ 0.2
NHLRC4P0CG21 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.33■□□□□ 0.2
NHLRC4P0CG21 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.33■□□□□ 0.2
NHLRC4P0CG21 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NHLRC4P0CG21 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NHLRC4P0CG21 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC16.33■□□□□ 0.2
NHLRC4P0CG21 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
NHLRC4P0CG21 ERN1-208ENST00000606895 2068 ntBASIC16.33■□□□□ 0.2
NHLRC4P0CG21 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NHLRC4P0CG21 TMEM202-AS1-202ENST00000565181 2325 ntBASIC16.33■□□□□ 0.2
NHLRC4P0CG21 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NHLRC4P0CG21 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NHLRC4P0CG21 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NHLRC4P0CG21 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NHLRC4P0CG21 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
NHLRC4P0CG21 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NHLRC4P0CG21 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC16.32■□□□□ 0.2
NHLRC4P0CG21 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.32■□□□□ 0.2
NHLRC4P0CG21 AC006015.1-201ENST00000429970 570 ntBASIC16.32■□□□□ 0.2
NHLRC4P0CG21 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NHLRC4P0CG21 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NHLRC4P0CG21 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.32■□□□□ 0.2
NHLRC4P0CG21 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC16.32■□□□□ 0.2
NHLRC4P0CG21 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.32■□□□□ 0.2
NHLRC4P0CG21 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.32■□□□□ 0.2
NHLRC4P0CG21 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NHLRC4P0CG21 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NHLRC4P0CG21 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NHLRC4P0CG21 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NHLRC4P0CG21 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC16.31■□□□□ 0.2
NHLRC4P0CG21 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
NHLRC4P0CG21 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NHLRC4P0CG21 AC133637.1-201ENST00000624115 1537 ntBASIC16.31■□□□□ 0.2
NHLRC4P0CG21 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
NHLRC4P0CG21 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.31■□□□□ 0.2
NHLRC4P0CG21 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NHLRC4P0CG21 AP005435.1-201ENST00000529293 1178 ntBASIC16.31■□□□□ 0.2
NHLRC4P0CG21 AC137761.2-201ENST00000561729 223 ntBASIC16.31■□□□□ 0.2
NHLRC4P0CG21 AC145350.3-201ENST00000569033 163 ntBASIC16.31■□□□□ 0.2
NHLRC4P0CG21 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NHLRC4P0CG21 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.31■□□□□ 0.2
NHLRC4P0CG21 MIR6089-201ENST00000616698 64 ntBASIC16.31■□□□□ 0.2
NHLRC4P0CG21 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.31■□□□□ 0.2
NHLRC4P0CG21 AC020928.2-201ENST00000588717 2197 ntBASIC16.31■□□□□ 0.2
NHLRC4P0CG21 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NHLRC4P0CG21 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NHLRC4P0CG21 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
NHLRC4P0CG21 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC16.3■□□□□ 0.2
NHLRC4P0CG21 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NHLRC4P0CG21 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NHLRC4P0CG21 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC16.3■□□□□ 0.2
NHLRC4P0CG21 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NHLRC4P0CG21 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NHLRC4P0CG21 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.3■□□□□ 0.2
NHLRC4P0CG21 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NHLRC4P0CG21 AC026185.1-201ENST00000445748 174 ntBASIC16.3■□□□□ 0.2
NHLRC4P0CG21 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.3■□□□□ 0.2
NHLRC4P0CG21 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.3■□□□□ 0.2
NHLRC4P0CG21 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NHLRC4P0CG21 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC16.3■□□□□ 0.2
NHLRC4P0CG21 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC16.3■□□□□ 0.2
NHLRC4P0CG21 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.3■□□□□ 0.2
NHLRC4P0CG21 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NHLRC4P0CG21 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NHLRC4P0CG21 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NHLRC4P0CG21 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NHLRC4P0CG21 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC16.29■□□□□ 0.2
NHLRC4P0CG21 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NHLRC4P0CG21 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.29■□□□□ 0.2
NHLRC4P0CG21 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.29■□□□□ 0.2
NHLRC4P0CG21 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NHLRC4P0CG21 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NHLRC4P0CG21 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
NHLRC4P0CG21 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NHLRC4P0CG21 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NHLRC4P0CG21 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NHLRC4P0CG21 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NHLRC4P0CG21 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NHLRC4P0CG21 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NHLRC4P0CG21 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NHLRC4P0CG21 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NHLRC4P0CG21 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NHLRC4P0CG21 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NHLRC4P0CG21 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.28■□□□□ 0.2
NHLRC4P0CG21 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC16.28■□□□□ 0.2
NHLRC4P0CG21 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
NHLRC4P0CG21 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.28■□□□□ 0.2
NHLRC4P0CG21 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.28■□□□□ 0.2
NHLRC4P0CG21 OR2I1P-207ENST00000453522 948 ntBASIC16.28■□□□□ 0.2
NHLRC4P0CG21 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.28■□□□□ 0.2
NHLRC4P0CG21 TMEM191A-211ENST00000637163 1067 ntBASIC16.28■□□□□ 0.2
NHLRC4P0CG21 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms