Protein–RNA interactions for Protein: P09110

ACAA1, 3-ketoacyl-CoA thiolase, peroxisomal, humanhuman

Predicted RBP Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1P09110 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.97■□□□□ 0.63
ACAA1P09110 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.97■□□□□ 0.63
ACAA1P09110 FP325331.1-202ENST00000623531 1380 ntBASIC18.97■□□□□ 0.63
ACAA1P09110 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ACAA1P09110 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.97■□□□□ 0.63
ACAA1P09110 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
ACAA1P09110 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.97■□□□□ 0.63
ACAA1P09110 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ACAA1P09110 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ACAA1P09110 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
ACAA1P09110 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ACAA1P09110 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.97■□□□□ 0.63
ACAA1P09110 KRT16P3-201ENST00000439127 1283 ntBASIC18.96■□□□□ 0.63
ACAA1P09110 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
ACAA1P09110 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
ACAA1P09110 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ACAA1P09110 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ACAA1P09110 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ACAA1P09110 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
ACAA1P09110 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ACAA1P09110 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ACAA1P09110 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.95■□□□□ 0.62
ACAA1P09110 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.95■□□□□ 0.62
ACAA1P09110 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ACAA1P09110 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ACAA1P09110 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ACAA1P09110 AC144652.1-201ENST00000609974 1624 ntBASIC18.95■□□□□ 0.62
ACAA1P09110 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ACAA1P09110 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
ACAA1P09110 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ACAA1P09110 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ACAA1P09110 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ACAA1P09110 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ACAA1P09110 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.94■□□□□ 0.62
ACAA1P09110 MIR6724-1-201ENST00000616420 92 ntBASIC18.94■□□□□ 0.62
ACAA1P09110 MIR6724-2-201ENST00000616483 92 ntBASIC18.94■□□□□ 0.62
ACAA1P09110 MIR6724-4-201ENST00000617390 92 ntBASIC18.94■□□□□ 0.62
ACAA1P09110 MIR6724-3-201ENST00000622482 92 ntBASIC18.94■□□□□ 0.62
ACAA1P09110 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ACAA1P09110 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ACAA1P09110 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
ACAA1P09110 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.93■□□□□ 0.62
ACAA1P09110 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.93■□□□□ 0.62
ACAA1P09110 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ACAA1P09110 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.93■□□□□ 0.62
ACAA1P09110 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ACAA1P09110 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.93■□□□□ 0.62
ACAA1P09110 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.93■□□□□ 0.62
ACAA1P09110 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ACAA1P09110 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ACAA1P09110 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ACAA1P09110 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
ACAA1P09110 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ACAA1P09110 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ACAA1P09110 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ACAA1P09110 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ACAA1P09110 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.92■□□□□ 0.62
ACAA1P09110 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.92■□□□□ 0.62
ACAA1P09110 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.92■□□□□ 0.62
ACAA1P09110 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ACAA1P09110 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.92■□□□□ 0.62
ACAA1P09110 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ACAA1P09110 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.92■□□□□ 0.62
ACAA1P09110 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.92■□□□□ 0.62
ACAA1P09110 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ACAA1P09110 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.91■□□□□ 0.62
ACAA1P09110 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ACAA1P09110 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ACAA1P09110 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.91■□□□□ 0.62
ACAA1P09110 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.91■□□□□ 0.62
ACAA1P09110 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ACAA1P09110 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ACAA1P09110 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.91■□□□□ 0.62
ACAA1P09110 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.91■□□□□ 0.62
ACAA1P09110 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.91■□□□□ 0.62
ACAA1P09110 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ACAA1P09110 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ACAA1P09110 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ACAA1P09110 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ACAA1P09110 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ACAA1P09110 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ACAA1P09110 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ACAA1P09110 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ACAA1P09110 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ACAA1P09110 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.9■□□□□ 0.62
ACAA1P09110 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.9■□□□□ 0.62
ACAA1P09110 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ACAA1P09110 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
ACAA1P09110 AL356441.2-201ENST00000443009 864 ntBASIC18.89■□□□□ 0.61
ACAA1P09110 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.89■□□□□ 0.61
ACAA1P09110 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ACAA1P09110 AL353803.4-201ENST00000565882 1934 ntBASIC18.89■□□□□ 0.61
ACAA1P09110 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.89■□□□□ 0.61
ACAA1P09110 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
ACAA1P09110 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
ACAA1P09110 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ACAA1P09110 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ACAA1P09110 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.88■□□□□ 0.61
ACAA1P09110 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
ACAA1P09110 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms