Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
IFNA1P01562 AC139530.1-201ENST00000575312 1977 ntBASIC17.58■□□□□ 0.4
IFNA1P01562 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
IFNA1P01562 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
IFNA1P01562 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
IFNA1P01562 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
IFNA1P01562 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
IFNA1P01562 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
IFNA1P01562 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
IFNA1P01562 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
IFNA1P01562 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IFNA1P01562 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.57■□□□□ 0.4
IFNA1P01562 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC17.57■□□□□ 0.4
IFNA1P01562 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.57■□□□□ 0.4
IFNA1P01562 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.57■□□□□ 0.4
IFNA1P01562 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.57■□□□□ 0.4
IFNA1P01562 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IFNA1P01562 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
IFNA1P01562 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.57■□□□□ 0.4
IFNA1P01562 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IFNA1P01562 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IFNA1P01562 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
IFNA1P01562 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.56■□□□□ 0.4
IFNA1P01562 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IFNA1P01562 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
IFNA1P01562 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
IFNA1P01562 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
IFNA1P01562 DUX4L13-201ENST00000554103 1267 ntBASIC17.56■□□□□ 0.4
IFNA1P01562 MIR3960-201ENST00000583311 91 ntBASIC17.56■□□□□ 0.4
IFNA1P01562 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
IFNA1P01562 DUX4L15-201ENST00000611059 1267 ntBASIC17.56■□□□□ 0.4
IFNA1P01562 DUX4L23-201ENST00000615195 1269 ntBASIC17.56■□□□□ 0.4
IFNA1P01562 DUX4L24-201ENST00000617576 1269 ntBASIC17.56■□□□□ 0.4
IFNA1P01562 DUX4L22-201ENST00000618238 1269 ntBASIC17.56■□□□□ 0.4
IFNA1P01562 DUX4L20-201ENST00000619712 1269 ntBASIC17.56■□□□□ 0.4
IFNA1P01562 DUX4L21-201ENST00000622058 1269 ntBASIC17.56■□□□□ 0.4
IFNA1P01562 DUX4L10-201ENST00000622460 1267 ntBASIC17.56■□□□□ 0.4
IFNA1P01562 DUX4L25-201ENST00000624915 1269 ntBASIC17.56■□□□□ 0.4
IFNA1P01562 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
IFNA1P01562 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.56■□□□□ 0.4
IFNA1P01562 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
IFNA1P01562 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
IFNA1P01562 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC17.56■□□□□ 0.4
IFNA1P01562 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IFNA1P01562 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
IFNA1P01562 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IFNA1P01562 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IFNA1P01562 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
IFNA1P01562 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.55■□□□□ 0.4
IFNA1P01562 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IFNA1P01562 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IFNA1P01562 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
IFNA1P01562 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.55■□□□□ 0.4
IFNA1P01562 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.55■□□□□ 0.4
IFNA1P01562 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
IFNA1P01562 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IFNA1P01562 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
IFNA1P01562 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.54■□□□□ 0.4
IFNA1P01562 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
IFNA1P01562 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
IFNA1P01562 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IFNA1P01562 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
IFNA1P01562 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IFNA1P01562 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IFNA1P01562 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
IFNA1P01562 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
IFNA1P01562 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
IFNA1P01562 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC17.54■□□□□ 0.4
IFNA1P01562 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC17.54■□□□□ 0.4
IFNA1P01562 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
IFNA1P01562 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
IFNA1P01562 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
IFNA1P01562 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.54■□□□□ 0.4
IFNA1P01562 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IFNA1P01562 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
IFNA1P01562 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
IFNA1P01562 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
IFNA1P01562 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
IFNA1P01562 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IFNA1P01562 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC17.53■□□□□ 0.4
IFNA1P01562 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.53■□□□□ 0.4
IFNA1P01562 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IFNA1P01562 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.52■□□□□ 0.4
IFNA1P01562 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
IFNA1P01562 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
IFNA1P01562 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IFNA1P01562 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.52■□□□□ 0.4
IFNA1P01562 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
IFNA1P01562 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.52■□□□□ 0.4
IFNA1P01562 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IFNA1P01562 HLA-V-202ENST00000446817 847 ntBASIC17.52■□□□□ 0.4
IFNA1P01562 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC17.52■□□□□ 0.4
IFNA1P01562 LINC01971-201ENST00000617888 1048 ntBASIC17.52■□□□□ 0.4
IFNA1P01562 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.52■□□□□ 0.4
IFNA1P01562 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
IFNA1P01562 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
IFNA1P01562 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
IFNA1P01562 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
IFNA1P01562 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.39
IFNA1P01562 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms