Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
GGPS1O95749 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
GGPS1O95749 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC25.07■■□□□ 1.6
GGPS1O95749 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
GGPS1O95749 OR2I1P-207ENST00000453522 948 ntBASIC25.07■■□□□ 1.6
GGPS1O95749 IGHV3-19-201ENST00000521488 291 ntBASIC25.07■■□□□ 1.6
GGPS1O95749 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
GGPS1O95749 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC25.07■■□□□ 1.6
GGPS1O95749 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
GGPS1O95749 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
GGPS1O95749 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
GGPS1O95749 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.06■■□□□ 1.6
GGPS1O95749 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
GGPS1O95749 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
GGPS1O95749 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
GGPS1O95749 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
GGPS1O95749 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC25.06■■□□□ 1.6
GGPS1O95749 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC25.06■■□□□ 1.6
GGPS1O95749 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
GGPS1O95749 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
GGPS1O95749 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC25.06■■□□□ 1.6
GGPS1O95749 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.06■■□□□ 1.6
GGPS1O95749 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
GGPS1O95749 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
GGPS1O95749 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
GGPS1O95749 AK1-201ENST00000223836 736 ntTSL 3 BASIC25.05■■□□□ 1.6
GGPS1O95749 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC25.05■■□□□ 1.6
GGPS1O95749 AC104564.3-201ENST00000582367 638 ntBASIC25.05■■□□□ 1.6
GGPS1O95749 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC25.05■■□□□ 1.6
GGPS1O95749 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
GGPS1O95749 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC25.05■■□□□ 1.6
GGPS1O95749 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC25.05■■□□□ 1.6
GGPS1O95749 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
GGPS1O95749 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
GGPS1O95749 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC25.04■■□□□ 1.6
GGPS1O95749 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
GGPS1O95749 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC25.04■■□□□ 1.6
GGPS1O95749 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
GGPS1O95749 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
GGPS1O95749 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
GGPS1O95749 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
GGPS1O95749 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
GGPS1O95749 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
GGPS1O95749 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
GGPS1O95749 ABCB10P4-201ENST00000566803 2184 ntBASIC25.03■■□□□ 1.6
GGPS1O95749 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
GGPS1O95749 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC25.03■■□□□ 1.6
GGPS1O95749 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC25.03■■□□□ 1.6
GGPS1O95749 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC25.03■■□□□ 1.6
GGPS1O95749 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC25.03■■□□□ 1.6
GGPS1O95749 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
GGPS1O95749 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
GGPS1O95749 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
GGPS1O95749 AL162430.1-201ENST00000480705 870 ntBASIC25.02■■□□□ 1.6
GGPS1O95749 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
GGPS1O95749 AC079630.1-202ENST00000618127 1840 ntBASIC25.02■■□□□ 1.6
GGPS1O95749 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
GGPS1O95749 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
GGPS1O95749 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
GGPS1O95749 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
GGPS1O95749 NME4-202ENST00000382940 766 ntTSL 3 BASIC25.01■■□□□ 1.59
GGPS1O95749 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC25.01■■□□□ 1.59
GGPS1O95749 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
GGPS1O95749 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC25.01■■□□□ 1.59
GGPS1O95749 NME4-211ENST00000620944 1193 ntTSL 2 BASIC25.01■■□□□ 1.59
GGPS1O95749 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.01■■□□□ 1.59
GGPS1O95749 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
GGPS1O95749 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
GGPS1O95749 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC25■■□□□ 1.59
GGPS1O95749 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
GGPS1O95749 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
GGPS1O95749 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
GGPS1O95749 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC25■■□□□ 1.59
GGPS1O95749 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC25■■□□□ 1.59
GGPS1O95749 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC25■■□□□ 1.59
GGPS1O95749 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC25■■□□□ 1.59
GGPS1O95749 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25■■□□□ 1.59
GGPS1O95749 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC25■■□□□ 1.59
GGPS1O95749 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
GGPS1O95749 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
GGPS1O95749 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
GGPS1O95749 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
GGPS1O95749 MIR572-201ENST00000384983 95 ntBASIC24.99■■□□□ 1.59
GGPS1O95749 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC24.99■■□□□ 1.59
GGPS1O95749 PARL-206ENST00000435888 1098 ntTSL 5 BASIC24.99■■□□□ 1.59
GGPS1O95749 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC24.99■■□□□ 1.59
GGPS1O95749 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC24.99■■□□□ 1.59
GGPS1O95749 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.99■■□□□ 1.59
GGPS1O95749 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.98■■□□□ 1.59
GGPS1O95749 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
GGPS1O95749 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.98■■□□□ 1.59
GGPS1O95749 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
GGPS1O95749 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
GGPS1O95749 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
GGPS1O95749 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
GGPS1O95749 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
GGPS1O95749 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
GGPS1O95749 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
GGPS1O95749 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.98■■□□□ 1.59
GGPS1O95749 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.98■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms