Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC35.11■■■■□ 3.21
PCF11O94913 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC35.11■■■■□ 3.21
PCF11O94913 AL358852.1-201ENST00000623174 1268 ntBASIC35.11■■■■□ 3.21
PCF11O94913 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
PCF11O94913 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
PCF11O94913 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC35.11■■■■□ 3.21
PCF11O94913 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
PCF11O94913 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC35.1■■■■□ 3.21
PCF11O94913 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
PCF11O94913 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC35.1■■■■□ 3.21
PCF11O94913 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
PCF11O94913 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC35.1■■■■□ 3.21
PCF11O94913 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
PCF11O94913 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
PCF11O94913 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
PCF11O94913 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
PCF11O94913 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
PCF11O94913 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
PCF11O94913 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC35.09■■■■□ 3.21
PCF11O94913 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
PCF11O94913 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
PCF11O94913 AC022517.1-201ENST00000592429 346 ntBASIC35.09■■■■□ 3.21
PCF11O94913 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC35.09■■■■□ 3.21
PCF11O94913 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC35.09■■■■□ 3.21
PCF11O94913 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC35.08■■■■□ 3.21
PCF11O94913 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
PCF11O94913 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC35.08■■■■□ 3.21
PCF11O94913 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
PCF11O94913 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
PCF11O94913 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC35.08■■■■□ 3.21
PCF11O94913 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
PCF11O94913 NME4-202ENST00000382940 766 ntTSL 3 BASIC35.08■■■■□ 3.21
PCF11O94913 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC35.08■■■■□ 3.21
PCF11O94913 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC35.08■■■■□ 3.21
PCF11O94913 NME4-211ENST00000620944 1193 ntTSL 2 BASIC35.08■■■■□ 3.21
PCF11O94913 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.21
PCF11O94913 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC35.07■■■■□ 3.2
PCF11O94913 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC35.07■■■■□ 3.2
PCF11O94913 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC35.07■■■■□ 3.2
PCF11O94913 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC35.07■■■■□ 3.2
PCF11O94913 AL354811.1-201ENST00000610286 706 ntBASIC35.07■■■■□ 3.2
PCF11O94913 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC35.07■■■■□ 3.2
PCF11O94913 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC35.07■■■■□ 3.2
PCF11O94913 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
PCF11O94913 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC35.06■■■■□ 3.2
PCF11O94913 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC35.06■■■■□ 3.2
PCF11O94913 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC35.06■■■■□ 3.2
PCF11O94913 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC35.06■■■■□ 3.2
PCF11O94913 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC35.06■■■■□ 3.2
PCF11O94913 H19-210ENST00000439725 1929 ntTSL 2 BASIC35.06■■■■□ 3.2
PCF11O94913 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC35.05■■■■□ 3.2
PCF11O94913 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC35.05■■■■□ 3.2
PCF11O94913 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC35.05■■■■□ 3.2
PCF11O94913 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC35.05■■■■□ 3.2
PCF11O94913 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC35.05■■■■□ 3.2
PCF11O94913 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC35.05■■■■□ 3.2
PCF11O94913 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC35.05■■■■□ 3.2
PCF11O94913 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC35.04■■■■□ 3.2
PCF11O94913 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC35.04■■■■□ 3.2
PCF11O94913 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC35.04■■■■□ 3.2
PCF11O94913 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC35.04■■■■□ 3.2
PCF11O94913 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC35.04■■■■□ 3.2
PCF11O94913 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC35.04■■■■□ 3.2
PCF11O94913 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC35.04■■■■□ 3.2
PCF11O94913 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC35.04■■■■□ 3.2
PCF11O94913 LINC01529-204ENST00000636474 1715 ntBASIC35.04■■■■□ 3.2
PCF11O94913 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
PCF11O94913 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC35.04■■■■□ 3.2
PCF11O94913 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
PCF11O94913 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
PCF11O94913 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
PCF11O94913 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC35.04■■■■□ 3.2
PCF11O94913 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC35.04■■■■□ 3.2
PCF11O94913 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC35.04■■■■□ 3.2
PCF11O94913 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC35.03■■■■□ 3.2
PCF11O94913 PREB-202ENST00000406567 1910 ntTSL 5 BASIC35.03■■■■□ 3.2
PCF11O94913 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
PCF11O94913 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC35.03■■■■□ 3.2
PCF11O94913 CCDC92B-201ENST00000575506 885 ntBASIC35.03■■■■□ 3.2
PCF11O94913 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
PCF11O94913 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC35.02■■■■□ 3.2
PCF11O94913 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
PCF11O94913 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC35.02■■■■□ 3.2
PCF11O94913 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC35.02■■■■□ 3.2
PCF11O94913 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
PCF11O94913 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
PCF11O94913 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC35.01■■■■□ 3.2
PCF11O94913 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC35.01■■■■□ 3.2
PCF11O94913 AC123595.1-201ENST00000440769 1046 ntBASIC35.01■■■■□ 3.2
PCF11O94913 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC35.01■■■■□ 3.2
PCF11O94913 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC35.01■■■■□ 3.19
PCF11O94913 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.19
PCF11O94913 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC35■■■■□ 3.19
PCF11O94913 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC35■■■■□ 3.19
PCF11O94913 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC35■■■■□ 3.19
PCF11O94913 TERF1P2-201ENST00000583350 1212 ntBASIC35■■■■□ 3.19
PCF11O94913 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
PCF11O94913 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC35■■■■□ 3.19
PCF11O94913 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC34.99■■■■□ 3.19
PCF11O94913 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC34.99■■■■□ 3.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms