Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCNKO75909 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCNKO75909 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCNKO75909 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.25■□□□□ 0.67
CCNKO75909 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCNKO75909 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCNKO75909 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CCNKO75909 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCNKO75909 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.25■□□□□ 0.67
CCNKO75909 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CCNKO75909 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCNKO75909 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCNKO75909 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCNKO75909 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCNKO75909 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CCNKO75909 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.24■□□□□ 0.67
CCNKO75909 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
CCNKO75909 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCNKO75909 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.24■□□□□ 0.67
CCNKO75909 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.24■□□□□ 0.67
CCNKO75909 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCNKO75909 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CCNKO75909 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CCNKO75909 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.24■□□□□ 0.67
CCNKO75909 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCNKO75909 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCNKO75909 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCNKO75909 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CCNKO75909 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCNKO75909 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCNKO75909 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.23■□□□□ 0.67
CCNKO75909 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCNKO75909 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.23■□□□□ 0.67
CCNKO75909 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.23■□□□□ 0.67
CCNKO75909 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
CCNKO75909 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCNKO75909 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCNKO75909 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.23■□□□□ 0.67
CCNKO75909 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCNKO75909 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.22■□□□□ 0.67
CCNKO75909 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCNKO75909 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCNKO75909 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCNKO75909 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCNKO75909 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCNKO75909 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCNKO75909 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCNKO75909 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCNKO75909 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCNKO75909 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCNKO75909 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCNKO75909 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCNKO75909 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.21■□□□□ 0.67
CCNKO75909 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.21■□□□□ 0.67
CCNKO75909 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCNKO75909 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.21■□□□□ 0.67
CCNKO75909 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.21■□□□□ 0.67
CCNKO75909 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CCNKO75909 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.21■□□□□ 0.67
CCNKO75909 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.21■□□□□ 0.67
CCNKO75909 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCNKO75909 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CCNKO75909 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNKO75909 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.2■□□□□ 0.66
CCNKO75909 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNKO75909 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCNKO75909 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CCNKO75909 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNKO75909 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNKO75909 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.2■□□□□ 0.66
CCNKO75909 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNKO75909 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNKO75909 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.19■□□□□ 0.66
CCNKO75909 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNKO75909 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.19■□□□□ 0.66
CCNKO75909 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CCNKO75909 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNKO75909 AC087741.3-201ENST00000624270 1347 ntBASIC19.19■□□□□ 0.66
CCNKO75909 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
CCNKO75909 FAM99A-202ENST00000538190 1989 ntBASIC19.19■□□□□ 0.66
CCNKO75909 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCNKO75909 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCNKO75909 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCNKO75909 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCNKO75909 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCNKO75909 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCNKO75909 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCNKO75909 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CCNKO75909 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCNKO75909 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCNKO75909 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCNKO75909 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CCNKO75909 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCNKO75909 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CCNKO75909 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.17■□□□□ 0.66
CCNKO75909 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.17■□□□□ 0.66
CCNKO75909 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CCNKO75909 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCNKO75909 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCNKO75909 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms