Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PDCD6O75340 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDCD6O75340 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDCD6O75340 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDCD6O75340 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDCD6O75340 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDCD6O75340 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PDCD6O75340 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDCD6O75340 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.76■□□□□ 0.59
PDCD6O75340 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDCD6O75340 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.76■□□□□ 0.59
PDCD6O75340 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.76■□□□□ 0.59
PDCD6O75340 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.76■□□□□ 0.59
PDCD6O75340 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.76■□□□□ 0.59
PDCD6O75340 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDCD6O75340 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
PDCD6O75340 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDCD6O75340 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PDCD6O75340 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDCD6O75340 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDCD6O75340 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDCD6O75340 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.75■□□□□ 0.59
PDCD6O75340 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDCD6O75340 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDCD6O75340 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDCD6O75340 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.75■□□□□ 0.59
PDCD6O75340 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.75■□□□□ 0.59
PDCD6O75340 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.75■□□□□ 0.59
PDCD6O75340 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDCD6O75340 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDCD6O75340 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDCD6O75340 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDCD6O75340 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDCD6O75340 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDCD6O75340 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDCD6O75340 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDCD6O75340 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDCD6O75340 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.74■□□□□ 0.59
PDCD6O75340 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.74■□□□□ 0.59
PDCD6O75340 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDCD6O75340 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.74■□□□□ 0.59
PDCD6O75340 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDCD6O75340 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDCD6O75340 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.74■□□□□ 0.59
PDCD6O75340 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDCD6O75340 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PDCD6O75340 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PDCD6O75340 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PDCD6O75340 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDCD6O75340 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDCD6O75340 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDCD6O75340 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDCD6O75340 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDCD6O75340 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.73■□□□□ 0.59
PDCD6O75340 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.73■□□□□ 0.59
PDCD6O75340 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PDCD6O75340 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDCD6O75340 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDCD6O75340 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.73■□□□□ 0.59
PDCD6O75340 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDCD6O75340 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
PDCD6O75340 AC005703.6-201ENST00000623265 1329 ntBASIC18.73■□□□□ 0.59
PDCD6O75340 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDCD6O75340 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
PDCD6O75340 AL031848.2-201ENST00000607670 837 ntBASIC18.72■□□□□ 0.59
PDCD6O75340 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.72■□□□□ 0.59
PDCD6O75340 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.72■□□□□ 0.59
PDCD6O75340 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PDCD6O75340 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.72■□□□□ 0.59
PDCD6O75340 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDCD6O75340 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDCD6O75340 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDCD6O75340 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.71■□□□□ 0.59
PDCD6O75340 PKD1P6-201ENST00000343738 4769 ntBASIC18.71■□□□□ 0.59
PDCD6O75340 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDCD6O75340 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDCD6O75340 AC137767.1-201ENST00000602918 1920 ntBASIC18.71■□□□□ 0.59
PDCD6O75340 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDCD6O75340 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDCD6O75340 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDCD6O75340 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.71■□□□□ 0.59
PDCD6O75340 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.71■□□□□ 0.59
PDCD6O75340 MIR6722-201ENST00000617286 78 ntBASIC18.71■□□□□ 0.59
PDCD6O75340 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDCD6O75340 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.71■□□□□ 0.59
PDCD6O75340 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDCD6O75340 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDCD6O75340 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
PDCD6O75340 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDCD6O75340 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDCD6O75340 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PDCD6O75340 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.7■□□□□ 0.58
PDCD6O75340 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDCD6O75340 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDCD6O75340 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDCD6O75340 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDCD6O75340 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDCD6O75340 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PDCD6O75340 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
PDCD6O75340 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms