Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
URB1O60287 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
URB1O60287 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
URB1O60287 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.03■□□□□ 0.96
URB1O60287 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
URB1O60287 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.03■□□□□ 0.96
URB1O60287 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.03■□□□□ 0.96
URB1O60287 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.03■□□□□ 0.96
URB1O60287 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
URB1O60287 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
URB1O60287 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
URB1O60287 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
URB1O60287 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
URB1O60287 KRT18P6-201ENST00000555540 1265 ntBASIC21.02■□□□□ 0.96
URB1O60287 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.02■□□□□ 0.96
URB1O60287 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
URB1O60287 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.02■□□□□ 0.96
URB1O60287 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.02■□□□□ 0.96
URB1O60287 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
URB1O60287 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
URB1O60287 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
URB1O60287 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
URB1O60287 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.01■□□□□ 0.95
URB1O60287 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.01■□□□□ 0.95
URB1O60287 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.01■□□□□ 0.95
URB1O60287 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.01■□□□□ 0.95
URB1O60287 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
URB1O60287 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
URB1O60287 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
URB1O60287 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
URB1O60287 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
URB1O60287 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
URB1O60287 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
URB1O60287 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
URB1O60287 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.01■□□□□ 0.95
URB1O60287 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.01■□□□□ 0.95
URB1O60287 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
URB1O60287 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21■□□□□ 0.95
URB1O60287 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
URB1O60287 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21■□□□□ 0.95
URB1O60287 DET1-205ENST00000558413 583 ntTSL 4 BASIC21■□□□□ 0.95
URB1O60287 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21■□□□□ 0.95
URB1O60287 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
URB1O60287 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
URB1O60287 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21■□□□□ 0.95
URB1O60287 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21■□□□□ 0.95
URB1O60287 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
URB1O60287 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
URB1O60287 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21■□□□□ 0.95
URB1O60287 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21■□□□□ 0.95
URB1O60287 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.99■□□□□ 0.95
URB1O60287 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
URB1O60287 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.99■□□□□ 0.95
URB1O60287 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
URB1O60287 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
URB1O60287 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
URB1O60287 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
URB1O60287 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
URB1O60287 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
URB1O60287 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
URB1O60287 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.99■□□□□ 0.95
URB1O60287 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.98■□□□□ 0.95
URB1O60287 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.98■□□□□ 0.95
URB1O60287 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.98■□□□□ 0.95
URB1O60287 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.98■□□□□ 0.95
URB1O60287 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
URB1O60287 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.98■□□□□ 0.95
URB1O60287 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.98■□□□□ 0.95
URB1O60287 AC087239.1-201ENST00000622671 572 ntBASIC20.98■□□□□ 0.95
URB1O60287 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
URB1O60287 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
URB1O60287 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.97■□□□□ 0.95
URB1O60287 AC092803.2-201ENST00000564287 1899 ntBASIC20.97■□□□□ 0.95
URB1O60287 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
URB1O60287 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
URB1O60287 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.97■□□□□ 0.95
URB1O60287 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
URB1O60287 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
URB1O60287 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
URB1O60287 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.97■□□□□ 0.95
URB1O60287 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
URB1O60287 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
URB1O60287 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
URB1O60287 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.97■□□□□ 0.95
URB1O60287 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.97■□□□□ 0.95
URB1O60287 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
URB1O60287 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
URB1O60287 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
URB1O60287 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
URB1O60287 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
URB1O60287 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
URB1O60287 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
URB1O60287 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.96■□□□□ 0.95
URB1O60287 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.96■□□□□ 0.95
URB1O60287 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.96■□□□□ 0.95
URB1O60287 AC105233.4-201ENST00000642045 216 ntBASIC20.96■□□□□ 0.95
URB1O60287 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
URB1O60287 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
URB1O60287 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
URB1O60287 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.95■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms