Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSX5O60225 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSX5O60225 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SSX5O60225 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.98■□□□□ 0.63
SSX5O60225 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SSX5O60225 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SSX5O60225 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.97■□□□□ 0.63
SSX5O60225 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SSX5O60225 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX5O60225 DUX4L9-201ENST00000449051 1259 ntBASIC18.97■□□□□ 0.63
SSX5O60225 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SSX5O60225 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX5O60225 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX5O60225 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX5O60225 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SSX5O60225 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX5O60225 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.97■□□□□ 0.63
SSX5O60225 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX5O60225 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX5O60225 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SSX5O60225 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SSX5O60225 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSX5O60225 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
SSX5O60225 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSX5O60225 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSX5O60225 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SSX5O60225 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SSX5O60225 AC011551.1-201ENST00000614101 683 ntBASIC18.96■□□□□ 0.63
SSX5O60225 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
SSX5O60225 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.96■□□□□ 0.63
SSX5O60225 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.96■□□□□ 0.63
SSX5O60225 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.96■□□□□ 0.63
SSX5O60225 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSX5O60225 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSX5O60225 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSX5O60225 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SSX5O60225 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.96■□□□□ 0.63
SSX5O60225 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SSX5O60225 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SSX5O60225 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
SSX5O60225 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SSX5O60225 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.95■□□□□ 0.62
SSX5O60225 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSX5O60225 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSX5O60225 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSX5O60225 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SSX5O60225 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.95■□□□□ 0.62
SSX5O60225 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SSX5O60225 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SSX5O60225 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSX5O60225 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSX5O60225 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSX5O60225 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.94■□□□□ 0.62
SSX5O60225 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SSX5O60225 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSX5O60225 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SSX5O60225 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSX5O60225 AC139530.1-201ENST00000575312 1977 ntBASIC18.94■□□□□ 0.62
SSX5O60225 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SSX5O60225 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SSX5O60225 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
SSX5O60225 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SSX5O60225 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SSX5O60225 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.94■□□□□ 0.62
SSX5O60225 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSX5O60225 RNF126P1-201ENST00000567452 1320 ntBASIC18.94■□□□□ 0.62
SSX5O60225 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSX5O60225 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SSX5O60225 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSX5O60225 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSX5O60225 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.93■□□□□ 0.62
SSX5O60225 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SSX5O60225 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SSX5O60225 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
SSX5O60225 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SSX5O60225 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SSX5O60225 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SSX5O60225 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SSX5O60225 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SSX5O60225 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SSX5O60225 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SSX5O60225 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
SSX5O60225 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SSX5O60225 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SSX5O60225 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.92■□□□□ 0.62
SSX5O60225 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SSX5O60225 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.92■□□□□ 0.62
SSX5O60225 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SSX5O60225 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SSX5O60225 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SSX5O60225 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SSX5O60225 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SSX5O60225 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.92■□□□□ 0.62
SSX5O60225 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SSX5O60225 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SSX5O60225 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.91■□□□□ 0.62
SSX5O60225 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SSX5O60225 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.91■□□□□ 0.62
SSX5O60225 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.91■□□□□ 0.62
SSX5O60225 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms