Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
SGCEO43556 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.55■□□□□ 0.72
SGCEO43556 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SGCEO43556 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SGCEO43556 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SGCEO43556 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SGCEO43556 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.55■□□□□ 0.72
SGCEO43556 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SGCEO43556 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SGCEO43556 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SGCEO43556 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.54■□□□□ 0.72
SGCEO43556 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SGCEO43556 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SGCEO43556 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.54■□□□□ 0.72
SGCEO43556 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SGCEO43556 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SGCEO43556 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.54■□□□□ 0.72
SGCEO43556 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.54■□□□□ 0.72
SGCEO43556 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.54■□□□□ 0.72
SGCEO43556 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.54■□□□□ 0.72
SGCEO43556 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.54■□□□□ 0.72
SGCEO43556 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.54■□□□□ 0.72
SGCEO43556 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SGCEO43556 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SGCEO43556 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SGCEO43556 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SGCEO43556 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SGCEO43556 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SGCEO43556 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.54■□□□□ 0.72
SGCEO43556 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SGCEO43556 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SGCEO43556 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SGCEO43556 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SGCEO43556 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SGCEO43556 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SGCEO43556 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SGCEO43556 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SGCEO43556 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SGCEO43556 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SGCEO43556 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SGCEO43556 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.52■□□□□ 0.72
SGCEO43556 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SGCEO43556 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.52■□□□□ 0.72
SGCEO43556 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SGCEO43556 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SGCEO43556 LINC01529-204ENST00000636474 1715 ntBASIC19.52■□□□□ 0.72
SGCEO43556 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SGCEO43556 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.52■□□□□ 0.72
SGCEO43556 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.52■□□□□ 0.72
SGCEO43556 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SGCEO43556 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.52■□□□□ 0.72
SGCEO43556 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SGCEO43556 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.72
SGCEO43556 FP325331.1-202ENST00000623531 1380 ntBASIC19.52■□□□□ 0.72
SGCEO43556 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SGCEO43556 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
SGCEO43556 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SGCEO43556 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SGCEO43556 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.51■□□□□ 0.71
SGCEO43556 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SGCEO43556 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.51■□□□□ 0.71
SGCEO43556 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SGCEO43556 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SGCEO43556 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.51■□□□□ 0.71
SGCEO43556 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SGCEO43556 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SGCEO43556 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.51■□□□□ 0.71
SGCEO43556 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SGCEO43556 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SGCEO43556 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SGCEO43556 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SGCEO43556 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.5■□□□□ 0.71
SGCEO43556 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SGCEO43556 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.5■□□□□ 0.71
SGCEO43556 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SGCEO43556 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SGCEO43556 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.5■□□□□ 0.71
SGCEO43556 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SGCEO43556 AL356740.2-201ENST00000601559 647 ntBASIC19.5■□□□□ 0.71
SGCEO43556 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.5■□□□□ 0.71
SGCEO43556 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.5■□□□□ 0.71
SGCEO43556 AL024507.2-201ENST00000606070 2574 ntBASIC19.5■□□□□ 0.71
SGCEO43556 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SGCEO43556 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SGCEO43556 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SGCEO43556 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SGCEO43556 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
SGCEO43556 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SGCEO43556 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SGCEO43556 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SGCEO43556 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.49■□□□□ 0.71
SGCEO43556 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SGCEO43556 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SGCEO43556 AL117332.1-201ENST00000622628 974 ntBASIC19.49■□□□□ 0.71
SGCEO43556 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
SGCEO43556 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.49■□□□□ 0.71
SGCEO43556 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.49■□□□□ 0.71
SGCEO43556 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SGCEO43556 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
SGCEO43556 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms