Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 GPX1P1-201ENST00000388829 606 ntBASIC21■□□□□ 0.95
RRP8O43159 CROCCP5-201ENST00000436658 830 ntBASIC21■□□□□ 0.95
RRP8O43159 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21■□□□□ 0.95
RRP8O43159 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21■□□□□ 0.95
RRP8O43159 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
RRP8O43159 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RRP8O43159 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RRP8O43159 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RRP8O43159 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.99■□□□□ 0.95
RRP8O43159 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RRP8O43159 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
RRP8O43159 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RRP8O43159 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RRP8O43159 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RRP8O43159 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.99■□□□□ 0.95
RRP8O43159 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RRP8O43159 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.99■□□□□ 0.95
RRP8O43159 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RRP8O43159 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RRP8O43159 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
RRP8O43159 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RRP8O43159 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RRP8O43159 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.99■□□□□ 0.95
RRP8O43159 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RRP8O43159 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.98■□□□□ 0.95
RRP8O43159 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RRP8O43159 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RRP8O43159 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RRP8O43159 KRT19P1-201ENST00000405746 1186 ntBASIC20.98■□□□□ 0.95
RRP8O43159 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.98■□□□□ 0.95
RRP8O43159 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RRP8O43159 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RRP8O43159 AC010525.1-201ENST00000585559 441 ntBASIC20.98■□□□□ 0.95
RRP8O43159 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.98■□□□□ 0.95
RRP8O43159 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RRP8O43159 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
RRP8O43159 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.97■□□□□ 0.95
RRP8O43159 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.97■□□□□ 0.95
RRP8O43159 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.97■□□□□ 0.95
RRP8O43159 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RRP8O43159 KRT18P11-201ENST00000435214 1283 ntBASIC20.97■□□□□ 0.95
RRP8O43159 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.97■□□□□ 0.95
RRP8O43159 AL499627.2-201ENST00000606283 725 ntBASIC20.97■□□□□ 0.95
RRP8O43159 MIR6089-201ENST00000616698 64 ntBASIC20.97■□□□□ 0.95
RRP8O43159 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.97■□□□□ 0.95
RRP8O43159 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RRP8O43159 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RRP8O43159 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.97■□□□□ 0.95
RRP8O43159 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RRP8O43159 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.96■□□□□ 0.95
RRP8O43159 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RRP8O43159 TSPY20P-201ENST00000450910 630 ntBASIC20.96■□□□□ 0.95
RRP8O43159 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.96■□□□□ 0.95
RRP8O43159 DUX4L4-201ENST00000566884 1269 ntBASIC20.96■□□□□ 0.95
RRP8O43159 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.96■□□□□ 0.95
RRP8O43159 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RRP8O43159 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.96■□□□□ 0.95
RRP8O43159 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RRP8O43159 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.95■□□□□ 0.94
RRP8O43159 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RRP8O43159 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RRP8O43159 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RRP8O43159 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RRP8O43159 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RRP8O43159 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RRP8O43159 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.95■□□□□ 0.94
RRP8O43159 KRT18P61-201ENST00000585825 1298 ntBASIC20.95■□□□□ 0.94
RRP8O43159 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.95■□□□□ 0.94
RRP8O43159 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RRP8O43159 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RRP8O43159 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RRP8O43159 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.95■□□□□ 0.94
RRP8O43159 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RRP8O43159 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.94■□□□□ 0.94
RRP8O43159 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RRP8O43159 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RRP8O43159 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RRP8O43159 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RRP8O43159 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RRP8O43159 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RRP8O43159 MIR663A-201ENST00000385250 93 ntBASIC20.94■□□□□ 0.94
RRP8O43159 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RRP8O43159 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.94■□□□□ 0.94
RRP8O43159 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.94■□□□□ 0.94
RRP8O43159 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.94■□□□□ 0.94
RRP8O43159 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RRP8O43159 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.94■□□□□ 0.94
RRP8O43159 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.94■□□□□ 0.94
RRP8O43159 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RRP8O43159 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RRP8O43159 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RRP8O43159 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.94■□□□□ 0.94
RRP8O43159 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
RRP8O43159 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RRP8O43159 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.93■□□□□ 0.94
RRP8O43159 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.93■□□□□ 0.94
RRP8O43159 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RRP8O43159 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RRP8O43159 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RRP8O43159 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms