Protein–RNA interactions for Protein: O15499

GSC2, Homeobox protein goosecoid-2, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2O15499 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
GSC2O15499 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
GSC2O15499 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
GSC2O15499 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.41■■□□□ 1.02
GSC2O15499 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
GSC2O15499 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GSC2O15499 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GSC2O15499 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
GSC2O15499 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.41■■□□□ 1.02
GSC2O15499 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GSC2O15499 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GSC2O15499 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.4■■□□□ 1.02
GSC2O15499 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.4■■□□□ 1.02
GSC2O15499 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.4■■□□□ 1.02
GSC2O15499 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.4■■□□□ 1.02
GSC2O15499 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
GSC2O15499 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.4■■□□□ 1.02
GSC2O15499 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
GSC2O15499 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
GSC2O15499 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.4■■□□□ 1.02
GSC2O15499 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
GSC2O15499 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
GSC2O15499 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.39■■□□□ 1.02
GSC2O15499 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
GSC2O15499 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.39■■□□□ 1.01
GSC2O15499 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.39■■□□□ 1.01
GSC2O15499 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
GSC2O15499 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
GSC2O15499 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
GSC2O15499 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
GSC2O15499 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
GSC2O15499 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
GSC2O15499 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
GSC2O15499 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
GSC2O15499 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.39■■□□□ 1.01
GSC2O15499 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
GSC2O15499 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.38■■□□□ 1.01
GSC2O15499 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
GSC2O15499 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GSC2O15499 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GSC2O15499 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.38■■□□□ 1.01
GSC2O15499 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GSC2O15499 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
GSC2O15499 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.38■■□□□ 1.01
GSC2O15499 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GSC2O15499 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
GSC2O15499 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
GSC2O15499 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GSC2O15499 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GSC2O15499 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.37■■□□□ 1.01
GSC2O15499 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GSC2O15499 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.37■■□□□ 1.01
GSC2O15499 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
GSC2O15499 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GSC2O15499 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.37■■□□□ 1.01
GSC2O15499 AC092296.2-201ENST00000589470 999 ntBASIC21.37■■□□□ 1.01
GSC2O15499 CR559946.2-201ENST00000623684 991 ntBASIC21.37■■□□□ 1.01
GSC2O15499 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GSC2O15499 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.37■■□□□ 1.01
GSC2O15499 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GSC2O15499 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.37■■□□□ 1.01
GSC2O15499 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.37■■□□□ 1.01
GSC2O15499 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.36■■□□□ 1.01
GSC2O15499 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
GSC2O15499 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
GSC2O15499 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.36■■□□□ 1.01
GSC2O15499 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
GSC2O15499 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.36■■□□□ 1.01
GSC2O15499 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
GSC2O15499 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
GSC2O15499 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
GSC2O15499 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
GSC2O15499 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.36■■□□□ 1.01
GSC2O15499 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
GSC2O15499 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.36■■□□□ 1.01
GSC2O15499 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
GSC2O15499 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
GSC2O15499 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.36■■□□□ 1.01
GSC2O15499 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
GSC2O15499 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
GSC2O15499 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.35■■□□□ 1.01
GSC2O15499 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
GSC2O15499 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
GSC2O15499 ZNRF2P2-203ENST00000454624 420 ntBASIC21.35■■□□□ 1.01
GSC2O15499 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.35■■□□□ 1.01
GSC2O15499 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GSC2O15499 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.35■■□□□ 1.01
GSC2O15499 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
GSC2O15499 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
GSC2O15499 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.34■■□□□ 1.01
GSC2O15499 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
GSC2O15499 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
GSC2O15499 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
GSC2O15499 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GSC2O15499 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GSC2O15499 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.34■■□□□ 1.01
GSC2O15499 AL353803.4-201ENST00000565882 1934 ntBASIC21.34■■□□□ 1.01
GSC2O15499 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GSC2O15499 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
GSC2O15499 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms