Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDX4O14627 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDX4O14627 DUX4L4-201ENST00000566884 1269 ntBASIC21.77■■□□□ 1.08
CDX4O14627 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDX4O14627 FP325331.1-202ENST00000623531 1380 ntBASIC21.76■■□□□ 1.07
CDX4O14627 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.76■■□□□ 1.07
CDX4O14627 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.76■■□□□ 1.07
CDX4O14627 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.76■■□□□ 1.07
CDX4O14627 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.76■■□□□ 1.07
CDX4O14627 CD99P1-205ENST00000527459 561 ntBASIC21.76■■□□□ 1.07
CDX4O14627 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.76■■□□□ 1.07
CDX4O14627 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDX4O14627 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CDX4O14627 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.76■■□□□ 1.07
CDX4O14627 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDX4O14627 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.76■■□□□ 1.07
CDX4O14627 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.75■■□□□ 1.07
CDX4O14627 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDX4O14627 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CDX4O14627 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDX4O14627 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
CDX4O14627 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.75■■□□□ 1.07
CDX4O14627 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDX4O14627 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.75■■□□□ 1.07
CDX4O14627 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.75■■□□□ 1.07
CDX4O14627 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDX4O14627 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CDX4O14627 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDX4O14627 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDX4O14627 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.74■■□□□ 1.07
CDX4O14627 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
CDX4O14627 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDX4O14627 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
CDX4O14627 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.74■■□□□ 1.07
CDX4O14627 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.74■■□□□ 1.07
CDX4O14627 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDX4O14627 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDX4O14627 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.73■■□□□ 1.07
CDX4O14627 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDX4O14627 GPX1P1-201ENST00000388829 606 ntBASIC21.73■■□□□ 1.07
CDX4O14627 KRT19P1-201ENST00000405746 1186 ntBASIC21.73■■□□□ 1.07
CDX4O14627 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDX4O14627 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CDX4O14627 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.73■■□□□ 1.07
CDX4O14627 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.73■■□□□ 1.07
CDX4O14627 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDX4O14627 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDX4O14627 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.73■■□□□ 1.07
CDX4O14627 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.72■■□□□ 1.07
CDX4O14627 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CDX4O14627 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDX4O14627 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDX4O14627 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CDX4O14627 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.72■■□□□ 1.07
CDX4O14627 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDX4O14627 TSPY20P-201ENST00000450910 630 ntBASIC21.72■■□□□ 1.07
CDX4O14627 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.72■■□□□ 1.07
CDX4O14627 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.72■■□□□ 1.07
CDX4O14627 AC011767.1-201ENST00000617410 1153 ntBASIC21.72■■□□□ 1.07
CDX4O14627 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDX4O14627 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDX4O14627 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDX4O14627 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.71■■□□□ 1.07
CDX4O14627 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDX4O14627 MIR663A-201ENST00000385250 93 ntBASIC21.71■■□□□ 1.07
CDX4O14627 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
CDX4O14627 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDX4O14627 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDX4O14627 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.7■■□□□ 1.06
CDX4O14627 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDX4O14627 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDX4O14627 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDX4O14627 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.7■■□□□ 1.06
CDX4O14627 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.7■■□□□ 1.06
CDX4O14627 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDX4O14627 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDX4O14627 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.7■■□□□ 1.06
CDX4O14627 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.7■■□□□ 1.06
CDX4O14627 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.69■■□□□ 1.06
CDX4O14627 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDX4O14627 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDX4O14627 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDX4O14627 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDX4O14627 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.69■■□□□ 1.06
CDX4O14627 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDX4O14627 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CDX4O14627 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDX4O14627 AC142086.2-201ENST00000569753 217 ntBASIC21.69■■□□□ 1.06
CDX4O14627 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.69■■□□□ 1.06
CDX4O14627 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDX4O14627 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.69■■□□□ 1.06
CDX4O14627 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDX4O14627 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDX4O14627 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
CDX4O14627 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDX4O14627 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDX4O14627 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDX4O14627 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDX4O14627 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.68■■□□□ 1.06
CDX4O14627 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms