Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.93■□□□□ 0.94
CLDN4O14493 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.92■□□□□ 0.94
CLDN4O14493 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.92■□□□□ 0.94
CLDN4O14493 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN4O14493 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN4O14493 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN4O14493 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN4O14493 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.92■□□□□ 0.94
CLDN4O14493 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN4O14493 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN4O14493 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.92■□□□□ 0.94
CLDN4O14493 AL136162.1-201ENST00000607711 1078 ntBASIC20.92■□□□□ 0.94
CLDN4O14493 AC011298.3-201ENST00000615796 283 ntBASIC20.92■□□□□ 0.94
CLDN4O14493 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN4O14493 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN4O14493 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.92■□□□□ 0.94
CLDN4O14493 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.92■□□□□ 0.94
CLDN4O14493 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.92■□□□□ 0.94
CLDN4O14493 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
CLDN4O14493 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN4O14493 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN4O14493 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN4O14493 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN4O14493 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CLDN4O14493 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN4O14493 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN4O14493 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN4O14493 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.91■□□□□ 0.94
CLDN4O14493 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN4O14493 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.91■□□□□ 0.94
CLDN4O14493 AL139246.5-201ENST00000606645 996 ntBASIC20.91■□□□□ 0.94
CLDN4O14493 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.91■□□□□ 0.94
CLDN4O14493 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.9■□□□□ 0.94
CLDN4O14493 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.9■□□□□ 0.94
CLDN4O14493 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN4O14493 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.9■□□□□ 0.94
CLDN4O14493 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN4O14493 AC135279.3-201ENST00000610945 1311 ntBASIC20.9■□□□□ 0.94
CLDN4O14493 PBX2P1-201ENST00000493219 1291 ntBASIC20.9■□□□□ 0.94
CLDN4O14493 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.9■□□□□ 0.94
CLDN4O14493 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.9■□□□□ 0.94
CLDN4O14493 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN4O14493 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.9■□□□□ 0.94
CLDN4O14493 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLDN4O14493 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLDN4O14493 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.89■□□□□ 0.94
CLDN4O14493 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CLDN4O14493 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CLDN4O14493 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLDN4O14493 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.89■□□□□ 0.94
CLDN4O14493 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN4O14493 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CLDN4O14493 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CLDN4O14493 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN4O14493 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.89■□□□□ 0.93
CLDN4O14493 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN4O14493 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.88■□□□□ 0.93
CLDN4O14493 AC019069.1-201ENST00000610008 1333 ntBASIC20.88■□□□□ 0.93
CLDN4O14493 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN4O14493 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN4O14493 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.88■□□□□ 0.93
CLDN4O14493 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.88■□□□□ 0.93
CLDN4O14493 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN4O14493 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN4O14493 AC133637.1-201ENST00000624115 1537 ntBASIC20.88■□□□□ 0.93
CLDN4O14493 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN4O14493 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN4O14493 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN4O14493 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
CLDN4O14493 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN4O14493 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN4O14493 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN4O14493 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN4O14493 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.87■□□□□ 0.93
CLDN4O14493 AC024257.2-201ENST00000549699 147 ntBASIC20.87■□□□□ 0.93
CLDN4O14493 AC106739.1-201ENST00000617035 715 ntBASIC20.87■□□□□ 0.93
CLDN4O14493 AC110285.6-201ENST00000617652 491 ntBASIC20.87■□□□□ 0.93
CLDN4O14493 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN4O14493 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN4O14493 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
CLDN4O14493 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN4O14493 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN4O14493 DUSP8P3-201ENST00000399571 1760 ntBASIC20.87■□□□□ 0.93
CLDN4O14493 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN4O14493 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN4O14493 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN4O14493 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN4O14493 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN4O14493 DUSP8P5-201ENST00000422884 1815 ntBASIC20.86■□□□□ 0.93
CLDN4O14493 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.86■□□□□ 0.93
CLDN4O14493 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
CLDN4O14493 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.86■□□□□ 0.93
CLDN4O14493 AC136469.2-201ENST00000623944 1028 ntBASIC20.86■□□□□ 0.93
CLDN4O14493 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN4O14493 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CLDN4O14493 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN4O14493 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.86■□□□□ 0.93
CLDN4O14493 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN4O14493 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CLDN4O14493 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms