Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AL022069.1-201ENST00000568025 1636 ntBASIC24.08■■□□□ 1.45
SOX1O00570 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.08■■□□□ 1.44
SOX1O00570 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.07■■□□□ 1.44
SOX1O00570 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SOX1O00570 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SOX1O00570 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SOX1O00570 AL158047.1-201ENST00000445918 881 ntBASIC24.07■■□□□ 1.44
SOX1O00570 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC24.07■■□□□ 1.44
SOX1O00570 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SOX1O00570 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SOX1O00570 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SOX1O00570 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SOX1O00570 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
SOX1O00570 ECEL1P3-201ENST00000427961 737 ntBASIC24.06■■□□□ 1.44
SOX1O00570 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
SOX1O00570 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC24.06■■□□□ 1.44
SOX1O00570 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC24.06■■□□□ 1.44
SOX1O00570 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC24.06■■□□□ 1.44
SOX1O00570 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.06■■□□□ 1.44
SOX1O00570 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.06■■□□□ 1.44
SOX1O00570 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SOX1O00570 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SOX1O00570 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.05■■□□□ 1.44
SOX1O00570 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC24.05■■□□□ 1.44
SOX1O00570 FAM210CP-201ENST00000445714 574 ntBASIC24.05■■□□□ 1.44
SOX1O00570 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC24.05■■□□□ 1.44
SOX1O00570 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC24.05■■□□□ 1.44
SOX1O00570 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SOX1O00570 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
SOX1O00570 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.04■■□□□ 1.44
SOX1O00570 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
SOX1O00570 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC24.04■■□□□ 1.44
SOX1O00570 AF201337.1-201ENST00000520239 748 ntBASIC24.04■■□□□ 1.44
SOX1O00570 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC24.04■■□□□ 1.44
SOX1O00570 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC24.04■■□□□ 1.44
SOX1O00570 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC24.04■■□□□ 1.44
SOX1O00570 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC24.04■■□□□ 1.44
SOX1O00570 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
SOX1O00570 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SOX1O00570 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
SOX1O00570 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SOX1O00570 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
SOX1O00570 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SOX1O00570 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
SOX1O00570 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SOX1O00570 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
SOX1O00570 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SOX1O00570 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC24.03■■□□□ 1.44
SOX1O00570 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
SOX1O00570 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
SOX1O00570 AC096887.2-201ENST00000623443 1957 ntBASIC24.02■■□□□ 1.44
SOX1O00570 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SOX1O00570 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC24.02■■□□□ 1.44
SOX1O00570 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SOX1O00570 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC24.02■■□□□ 1.44
SOX1O00570 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC24.02■■□□□ 1.44
SOX1O00570 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SOX1O00570 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC24.02■■□□□ 1.44
SOX1O00570 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC24.02■■□□□ 1.44
SOX1O00570 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC24.02■■□□□ 1.44
SOX1O00570 AC105036.2-201ENST00000569468 176 ntBASIC24.02■■□□□ 1.44
SOX1O00570 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC24.02■■□□□ 1.44
SOX1O00570 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
SOX1O00570 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
SOX1O00570 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SOX1O00570 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SOX1O00570 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
SOX1O00570 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SOX1O00570 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
SOX1O00570 BAALC-201ENST00000297574 801 ntTSL 3 BASIC24.01■■□□□ 1.43
SOX1O00570 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC24.01■■□□□ 1.43
SOX1O00570 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC24.01■■□□□ 1.43
SOX1O00570 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC24.01■■□□□ 1.43
SOX1O00570 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SOX1O00570 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
SOX1O00570 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
SOX1O00570 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC24■■□□□ 1.43
SOX1O00570 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC24■■□□□ 1.43
SOX1O00570 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC24■■□□□ 1.43
SOX1O00570 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC24■■□□□ 1.43
SOX1O00570 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC24■■□□□ 1.43
SOX1O00570 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24■■□□□ 1.43
SOX1O00570 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC24■■□□□ 1.43
SOX1O00570 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC24■■□□□ 1.43
SOX1O00570 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC23.99■■□□□ 1.43
SOX1O00570 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SOX1O00570 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
SOX1O00570 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SOX1O00570 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SOX1O00570 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC23.99■■□□□ 1.43
SOX1O00570 RARRES2P4-201ENST00000514074 484 ntBASIC23.99■■□□□ 1.43
SOX1O00570 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC23.99■■□□□ 1.43
SOX1O00570 AC142381.4-202ENST00000563973 229 ntBASIC23.99■■□□□ 1.43
SOX1O00570 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.99■■□□□ 1.43
SOX1O00570 AC092118.2-201ENST00000613495 667 ntBASIC23.99■■□□□ 1.43
SOX1O00570 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.99■■□□□ 1.43
SOX1O00570 BX005040.4-201ENST00000637145 1518 ntBASIC23.99■■□□□ 1.43
SOX1O00570 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
SOX1O00570 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SOX1O00570 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms