Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
BOLA2-SMG1P6H3BVE0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.46■□□□□ 0.71
BOLA2-SMG1P6H3BVE0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BOLA2-SMG1P6H3BVE0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BOLA2-SMG1P6H3BVE0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
BOLA2-SMG1P6H3BVE0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.45■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.45■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.45■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.45■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.44■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.44■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.44■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.42■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.42■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.42■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 HLA-L-211ENST00000482052 1765 ntBASIC19.42■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.4■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.4■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC19.4■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.4■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 LINC01006-201ENST00000333319 2292 ntBASIC19.4■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.4■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BOLA2-SMG1P6H3BVE0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms