Protein–RNA interactions for Protein: B3KS81

SRRM5, Serine/arginine repetitive matrix protein 5, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM5B3KS81 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRRM5B3KS81 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.7■□□□□ 0.58
SRRM5B3KS81 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SRRM5B3KS81 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.7■□□□□ 0.58
SRRM5B3KS81 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRRM5B3KS81 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.7■□□□□ 0.58
SRRM5B3KS81 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
SRRM5B3KS81 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRRM5B3KS81 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SRRM5B3KS81 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.69■□□□□ 0.58
SRRM5B3KS81 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRRM5B3KS81 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
SRRM5B3KS81 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.69■□□□□ 0.58
SRRM5B3KS81 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.69■□□□□ 0.58
SRRM5B3KS81 AL499627.2-201ENST00000606283 725 ntBASIC18.69■□□□□ 0.58
SRRM5B3KS81 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.69■□□□□ 0.58
SRRM5B3KS81 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRRM5B3KS81 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.69■□□□□ 0.58
SRRM5B3KS81 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRRM5B3KS81 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.68■□□□□ 0.58
SRRM5B3KS81 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRRM5B3KS81 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SRRM5B3KS81 AC006455.2-201ENST00000429931 906 ntBASIC18.68■□□□□ 0.58
SRRM5B3KS81 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.68■□□□□ 0.58
SRRM5B3KS81 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.68■□□□□ 0.58
SRRM5B3KS81 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRRM5B3KS81 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SRRM5B3KS81 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SRRM5B3KS81 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRRM5B3KS81 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRRM5B3KS81 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SRRM5B3KS81 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRRM5B3KS81 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.67■□□□□ 0.58
SRRM5B3KS81 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRRM5B3KS81 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SRRM5B3KS81 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SRRM5B3KS81 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.67■□□□□ 0.58
SRRM5B3KS81 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRRM5B3KS81 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.66■□□□□ 0.58
SRRM5B3KS81 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRRM5B3KS81 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SRRM5B3KS81 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRRM5B3KS81 C9orf163-202ENST00000624034 2573 ntBASIC18.66■□□□□ 0.58
SRRM5B3KS81 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRRM5B3KS81 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRRM5B3KS81 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRRM5B3KS81 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.66■□□□□ 0.58
SRRM5B3KS81 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.66■□□□□ 0.58
SRRM5B3KS81 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SRRM5B3KS81 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
SRRM5B3KS81 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.66■□□□□ 0.58
SRRM5B3KS81 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SRRM5B3KS81 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRRM5B3KS81 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRRM5B3KS81 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SRRM5B3KS81 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.65■□□□□ 0.58
SRRM5B3KS81 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SRRM5B3KS81 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SRRM5B3KS81 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.65■□□□□ 0.58
SRRM5B3KS81 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SRRM5B3KS81 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SRRM5B3KS81 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
SRRM5B3KS81 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRRM5B3KS81 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRRM5B3KS81 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRRM5B3KS81 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.65■□□□□ 0.58
SRRM5B3KS81 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.65■□□□□ 0.58
SRRM5B3KS81 DUX4L19-201ENST00000557448 1267 ntBASIC18.65■□□□□ 0.58
SRRM5B3KS81 pRNA.6-201ENST00000610482 90 ntBASIC18.65■□□□□ 0.58
SRRM5B3KS81 pRNA.5-201ENST00000612139 90 ntBASIC18.65■□□□□ 0.58
SRRM5B3KS81 pRNA.11-201ENST00000618423 90 ntBASIC18.65■□□□□ 0.58
SRRM5B3KS81 pRNA.13-201ENST00000619112 90 ntBASIC18.65■□□□□ 0.58
SRRM5B3KS81 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SRRM5B3KS81 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRRM5B3KS81 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.65■□□□□ 0.58
SRRM5B3KS81 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
SRRM5B3KS81 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.64■□□□□ 0.58
SRRM5B3KS81 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SRRM5B3KS81 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.64■□□□□ 0.57
SRRM5B3KS81 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRRM5B3KS81 MIR935-201ENST00000401179 91 ntBASIC18.64■□□□□ 0.57
SRRM5B3KS81 AC096631.2-201ENST00000436136 790 ntBASIC18.64■□□□□ 0.57
SRRM5B3KS81 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.64■□□□□ 0.57
SRRM5B3KS81 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SRRM5B3KS81 AC110285.6-201ENST00000617652 491 ntBASIC18.64■□□□□ 0.57
SRRM5B3KS81 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SRRM5B3KS81 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRRM5B3KS81 AC068473.5-201ENST00000616428 2072 ntBASIC18.64■□□□□ 0.57
SRRM5B3KS81 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRRM5B3KS81 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.63■□□□□ 0.57
SRRM5B3KS81 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SRRM5B3KS81 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.63■□□□□ 0.57
SRRM5B3KS81 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM5B3KS81 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.63■□□□□ 0.57
SRRM5B3KS81 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.63■□□□□ 0.57
SRRM5B3KS81 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.63■□□□□ 0.57
SRRM5B3KS81 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SRRM5B3KS81 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM5B3KS81 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM5B3KS81 SYT6-210ENST00000641643 1587 ntBASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms