Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC16.05■□□□□ 0.16
SMIM9A6NGZ8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC16.05■□□□□ 0.16
SMIM9A6NGZ8 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC16.05■□□□□ 0.16
SMIM9A6NGZ8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM9A6NGZ8 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM9A6NGZ8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC16.05■□□□□ 0.16
SMIM9A6NGZ8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SMIM9A6NGZ8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SMIM9A6NGZ8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM9A6NGZ8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM9A6NGZ8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM9A6NGZ8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM9A6NGZ8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM9A6NGZ8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.05■□□□□ 0.16
SMIM9A6NGZ8 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM9A6NGZ8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.05■□□□□ 0.16
SMIM9A6NGZ8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM9A6NGZ8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.05■□□□□ 0.16
SMIM9A6NGZ8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC16.05■□□□□ 0.16
SMIM9A6NGZ8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.05■□□□□ 0.16
SMIM9A6NGZ8 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
SMIM9A6NGZ8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SMIM9A6NGZ8 AC106739.1-201ENST00000617035 715 ntBASIC16.05■□□□□ 0.16
SMIM9A6NGZ8 AC136469.2-201ENST00000623944 1028 ntBASIC16.05■□□□□ 0.16
SMIM9A6NGZ8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM9A6NGZ8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
SMIM9A6NGZ8 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC16.05■□□□□ 0.16
SMIM9A6NGZ8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM9A6NGZ8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC16.05■□□□□ 0.16
SMIM9A6NGZ8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM9A6NGZ8 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM9A6NGZ8 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC16.04■□□□□ 0.16
SMIM9A6NGZ8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM9A6NGZ8 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.04■□□□□ 0.16
SMIM9A6NGZ8 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM9A6NGZ8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC16.04■□□□□ 0.16
SMIM9A6NGZ8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM9A6NGZ8 H19-210ENST00000439725 1929 ntTSL 2 BASIC16.04■□□□□ 0.16
SMIM9A6NGZ8 AC006455.2-201ENST00000429931 906 ntBASIC16.04■□□□□ 0.16
SMIM9A6NGZ8 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC16.04■□□□□ 0.16
SMIM9A6NGZ8 PBX2P1-201ENST00000493219 1291 ntBASIC16.04■□□□□ 0.16
SMIM9A6NGZ8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM9A6NGZ8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC16.04■□□□□ 0.16
SMIM9A6NGZ8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SMIM9A6NGZ8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM9A6NGZ8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM9A6NGZ8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM9A6NGZ8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM9A6NGZ8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM9A6NGZ8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM9A6NGZ8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC16.03■□□□□ 0.16
SMIM9A6NGZ8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SMIM9A6NGZ8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC16.03■□□□□ 0.16
SMIM9A6NGZ8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMIM9A6NGZ8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SMIM9A6NGZ8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMIM9A6NGZ8 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC16.03■□□□□ 0.16
SMIM9A6NGZ8 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SMIM9A6NGZ8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SMIM9A6NGZ8 AC133637.1-201ENST00000624115 1537 ntBASIC16.03■□□□□ 0.16
SMIM9A6NGZ8 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SMIM9A6NGZ8 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.02■□□□□ 0.16
SMIM9A6NGZ8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC16.02■□□□□ 0.16
SMIM9A6NGZ8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SMIM9A6NGZ8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SMIM9A6NGZ8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SMIM9A6NGZ8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SMIM9A6NGZ8 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC16.02■□□□□ 0.16
SMIM9A6NGZ8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SMIM9A6NGZ8 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SMIM9A6NGZ8 EDA-201ENST00000338901 1233 ntBASIC16.02■□□□□ 0.16
SMIM9A6NGZ8 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SMIM9A6NGZ8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.02■□□□□ 0.16
SMIM9A6NGZ8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.02■□□□□ 0.16
SMIM9A6NGZ8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.02■□□□□ 0.16
SMIM9A6NGZ8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.02■□□□□ 0.16
SMIM9A6NGZ8 AC110285.6-201ENST00000617652 491 ntBASIC16.02■□□□□ 0.16
SMIM9A6NGZ8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.02■□□□□ 0.15
SMIM9A6NGZ8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SMIM9A6NGZ8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SMIM9A6NGZ8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMIM9A6NGZ8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMIM9A6NGZ8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC16.01■□□□□ 0.15
SMIM9A6NGZ8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMIM9A6NGZ8 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMIM9A6NGZ8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMIM9A6NGZ8 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SMIM9A6NGZ8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.01■□□□□ 0.15
SMIM9A6NGZ8 AC024257.2-201ENST00000549699 147 ntBASIC16.01■□□□□ 0.15
SMIM9A6NGZ8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.01■□□□□ 0.15
SMIM9A6NGZ8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.01■□□□□ 0.15
SMIM9A6NGZ8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SMIM9A6NGZ8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
SMIM9A6NGZ8 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SMIM9A6NGZ8 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMIM9A6NGZ8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMIM9A6NGZ8 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMIM9A6NGZ8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMIM9A6NGZ8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.01■□□□□ 0.15
SMIM9A6NGZ8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms