Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.02■□□□□ 0.64
MEIS3P1A6NDR6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MEIS3P1A6NDR6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MEIS3P1A6NDR6 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MEIS3P1A6NDR6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
MEIS3P1A6NDR6 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MEIS3P1A6NDR6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MEIS3P1A6NDR6 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MEIS3P1A6NDR6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MEIS3P1A6NDR6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MEIS3P1A6NDR6 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MEIS3P1A6NDR6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
MEIS3P1A6NDR6 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MEIS3P1A6NDR6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.01■□□□□ 0.63
MEIS3P1A6NDR6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MEIS3P1A6NDR6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
MEIS3P1A6NDR6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MEIS3P1A6NDR6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MEIS3P1A6NDR6 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MEIS3P1A6NDR6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MEIS3P1A6NDR6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MEIS3P1A6NDR6 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MEIS3P1A6NDR6 MIR639-201ENST00000384974 98 ntBASIC19.01■□□□□ 0.63
MEIS3P1A6NDR6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
MEIS3P1A6NDR6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MEIS3P1A6NDR6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
MEIS3P1A6NDR6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.01■□□□□ 0.63
MEIS3P1A6NDR6 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
MEIS3P1A6NDR6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
MEIS3P1A6NDR6 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
MEIS3P1A6NDR6 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
MEIS3P1A6NDR6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
MEIS3P1A6NDR6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19■□□□□ 0.63
MEIS3P1A6NDR6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
MEIS3P1A6NDR6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MEIS3P1A6NDR6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MEIS3P1A6NDR6 AC080038.3-201ENST00000623346 1952 ntBASIC19■□□□□ 0.63
MEIS3P1A6NDR6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MEIS3P1A6NDR6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MEIS3P1A6NDR6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
MEIS3P1A6NDR6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
MEIS3P1A6NDR6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19■□□□□ 0.63
MEIS3P1A6NDR6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19■□□□□ 0.63
MEIS3P1A6NDR6 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MEIS3P1A6NDR6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MEIS3P1A6NDR6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MEIS3P1A6NDR6 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MEIS3P1A6NDR6 SPCS2P3-201ENST00000500401 656 ntBASIC18.99■□□□□ 0.63
MEIS3P1A6NDR6 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
MEIS3P1A6NDR6 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MEIS3P1A6NDR6 AC018755.3-202ENST00000596210 929 ntBASIC18.99■□□□□ 0.63
MEIS3P1A6NDR6 MIR7108-201ENST00000614319 87 ntBASIC18.99■□□□□ 0.63
MEIS3P1A6NDR6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
MEIS3P1A6NDR6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
MEIS3P1A6NDR6 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MEIS3P1A6NDR6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
MEIS3P1A6NDR6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
MEIS3P1A6NDR6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MEIS3P1A6NDR6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
MEIS3P1A6NDR6 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.98■□□□□ 0.63
MEIS3P1A6NDR6 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.98■□□□□ 0.63
MEIS3P1A6NDR6 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.98■□□□□ 0.63
MEIS3P1A6NDR6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.98■□□□□ 0.63
MEIS3P1A6NDR6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.98■□□□□ 0.63
MEIS3P1A6NDR6 GPX1-201ENST00000419349 1106 ntBASIC18.98■□□□□ 0.63
MEIS3P1A6NDR6 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.98■□□□□ 0.63
MEIS3P1A6NDR6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MEIS3P1A6NDR6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.98■□□□□ 0.63
MEIS3P1A6NDR6 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.98■□□□□ 0.63
MEIS3P1A6NDR6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.98■□□□□ 0.63
MEIS3P1A6NDR6 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MEIS3P1A6NDR6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MEIS3P1A6NDR6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MEIS3P1A6NDR6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MEIS3P1A6NDR6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.97■□□□□ 0.63
MEIS3P1A6NDR6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MEIS3P1A6NDR6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
MEIS3P1A6NDR6 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
MEIS3P1A6NDR6 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.97■□□□□ 0.63
MEIS3P1A6NDR6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MEIS3P1A6NDR6 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MEIS3P1A6NDR6 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MEIS3P1A6NDR6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MEIS3P1A6NDR6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MEIS3P1A6NDR6 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
MEIS3P1A6NDR6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.97■□□□□ 0.63
MEIS3P1A6NDR6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.96■□□□□ 0.63
MEIS3P1A6NDR6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.96■□□□□ 0.63
MEIS3P1A6NDR6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MEIS3P1A6NDR6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.96■□□□□ 0.63
MEIS3P1A6NDR6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.96■□□□□ 0.63
MEIS3P1A6NDR6 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MEIS3P1A6NDR6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MEIS3P1A6NDR6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.96■□□□□ 0.63
MEIS3P1A6NDR6 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MEIS3P1A6NDR6 SLC25A24-204ENST00000569674 2357 ntBASIC18.95■□□□□ 0.62
MEIS3P1A6NDR6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MEIS3P1A6NDR6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.95■□□□□ 0.62
MEIS3P1A6NDR6 AC087393.1-201ENST00000582896 145 ntBASIC18.95■□□□□ 0.62
MEIS3P1A6NDR6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms