Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 AC137630.3-201ENST00000607245 391 ntBASIC22.15■■□□□ 1.14
CCDC189A1A4V9 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.15■■□□□ 1.14
CCDC189A1A4V9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.15■■□□□ 1.14
CCDC189A1A4V9 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCDC189A1A4V9 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCDC189A1A4V9 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CCDC189A1A4V9 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CCDC189A1A4V9 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CCDC189A1A4V9 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CCDC189A1A4V9 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
CCDC189A1A4V9 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
CCDC189A1A4V9 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC22.14■■□□□ 1.13
CCDC189A1A4V9 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.14■■□□□ 1.13
CCDC189A1A4V9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CCDC189A1A4V9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
CCDC189A1A4V9 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CCDC189A1A4V9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CCDC189A1A4V9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
CCDC189A1A4V9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.13■■□□□ 1.13
CCDC189A1A4V9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.13■■□□□ 1.13
CCDC189A1A4V9 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.13■■□□□ 1.13
CCDC189A1A4V9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.13■■□□□ 1.13
CCDC189A1A4V9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CCDC189A1A4V9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.13■■□□□ 1.13
CCDC189A1A4V9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCDC189A1A4V9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCDC189A1A4V9 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.13■■□□□ 1.13
CCDC189A1A4V9 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.13■■□□□ 1.13
CCDC189A1A4V9 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CCDC189A1A4V9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCDC189A1A4V9 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.13■■□□□ 1.13
CCDC189A1A4V9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CCDC189A1A4V9 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
CCDC189A1A4V9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.12■■□□□ 1.13
CCDC189A1A4V9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CCDC189A1A4V9 AC103724.3-201ENST00000564481 992 ntBASIC22.12■■□□□ 1.13
CCDC189A1A4V9 SNX5-217ENST00000606557 1087 ntBASIC22.12■■□□□ 1.13
CCDC189A1A4V9 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.12■■□□□ 1.13
CCDC189A1A4V9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
CCDC189A1A4V9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CCDC189A1A4V9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CCDC189A1A4V9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CCDC189A1A4V9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CCDC189A1A4V9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCDC189A1A4V9 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
CCDC189A1A4V9 AL033527.3-201ENST00000566366 1196 ntBASIC22.11■■□□□ 1.13
CCDC189A1A4V9 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCDC189A1A4V9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCDC189A1A4V9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCDC189A1A4V9 AC137767.1-201ENST00000602918 1920 ntBASIC22.11■■□□□ 1.13
CCDC189A1A4V9 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCDC189A1A4V9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCDC189A1A4V9 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCDC189A1A4V9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CCDC189A1A4V9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
CCDC189A1A4V9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CCDC189A1A4V9 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC189A1A4V9 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
CCDC189A1A4V9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.1■■□□□ 1.13
CCDC189A1A4V9 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC189A1A4V9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC189A1A4V9 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC189A1A4V9 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.1■■□□□ 1.13
CCDC189A1A4V9 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.1■■□□□ 1.13
CCDC189A1A4V9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.1■■□□□ 1.13
CCDC189A1A4V9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC189A1A4V9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC189A1A4V9 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC189A1A4V9 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.1■■□□□ 1.13
CCDC189A1A4V9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC189A1A4V9 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC189A1A4V9 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC189A1A4V9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.09■■□□□ 1.13
CCDC189A1A4V9 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC189A1A4V9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
CCDC189A1A4V9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.09■■□□□ 1.13
CCDC189A1A4V9 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.09■■□□□ 1.13
CCDC189A1A4V9 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC189A1A4V9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCDC189A1A4V9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.08■■□□□ 1.13
CCDC189A1A4V9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCDC189A1A4V9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCDC189A1A4V9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCDC189A1A4V9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CCDC189A1A4V9 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CCDC189A1A4V9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
CCDC189A1A4V9 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
CCDC189A1A4V9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.08■■□□□ 1.12
CCDC189A1A4V9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCDC189A1A4V9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CCDC189A1A4V9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC22.07■■□□□ 1.12
CCDC189A1A4V9 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CCDC189A1A4V9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCDC189A1A4V9 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.07■■□□□ 1.12
CCDC189A1A4V9 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.07■■□□□ 1.12
CCDC189A1A4V9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CCDC189A1A4V9 AC233723.2-201ENST00000623798 2106 ntBASIC22.07■■□□□ 1.12
CCDC189A1A4V9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
CCDC189A1A4V9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.07■■□□□ 1.12
CCDC189A1A4V9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms