Protein–RNA interactions for Protein: A0A1B0GVH6

C13orf42, Chromosome 13 open reading frame 42, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C13orf42A0A1B0GVH6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
C13orf42A0A1B0GVH6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.71■□□□□ 0.59
C13orf42A0A1B0GVH6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
C13orf42A0A1B0GVH6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
C13orf42A0A1B0GVH6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C13orf42A0A1B0GVH6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C13orf42A0A1B0GVH6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C13orf42A0A1B0GVH6 KRT18P60-201ENST00000312876 1297 ntBASIC18.7■□□□□ 0.58
C13orf42A0A1B0GVH6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C13orf42A0A1B0GVH6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C13orf42A0A1B0GVH6 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
C13orf42A0A1B0GVH6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
C13orf42A0A1B0GVH6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
C13orf42A0A1B0GVH6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.7■□□□□ 0.58
C13orf42A0A1B0GVH6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
C13orf42A0A1B0GVH6 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
C13orf42A0A1B0GVH6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.7■□□□□ 0.58
C13orf42A0A1B0GVH6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
C13orf42A0A1B0GVH6 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C13orf42A0A1B0GVH6 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
C13orf42A0A1B0GVH6 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
C13orf42A0A1B0GVH6 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.69■□□□□ 0.58
C13orf42A0A1B0GVH6 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C13orf42A0A1B0GVH6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
C13orf42A0A1B0GVH6 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
C13orf42A0A1B0GVH6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
C13orf42A0A1B0GVH6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.69■□□□□ 0.58
C13orf42A0A1B0GVH6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C13orf42A0A1B0GVH6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C13orf42A0A1B0GVH6 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
C13orf42A0A1B0GVH6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C13orf42A0A1B0GVH6 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
C13orf42A0A1B0GVH6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C13orf42A0A1B0GVH6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
C13orf42A0A1B0GVH6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
C13orf42A0A1B0GVH6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C13orf42A0A1B0GVH6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.68■□□□□ 0.58
C13orf42A0A1B0GVH6 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.68■□□□□ 0.58
C13orf42A0A1B0GVH6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
C13orf42A0A1B0GVH6 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
C13orf42A0A1B0GVH6 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.68■□□□□ 0.58
C13orf42A0A1B0GVH6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.68■□□□□ 0.58
C13orf42A0A1B0GVH6 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.68■□□□□ 0.58
C13orf42A0A1B0GVH6 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
C13orf42A0A1B0GVH6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.67■□□□□ 0.58
C13orf42A0A1B0GVH6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
C13orf42A0A1B0GVH6 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C13orf42A0A1B0GVH6 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C13orf42A0A1B0GVH6 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C13orf42A0A1B0GVH6 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
C13orf42A0A1B0GVH6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C13orf42A0A1B0GVH6 ESRRAP2-201ENST00000418437 1549 ntBASIC18.67■□□□□ 0.58
C13orf42A0A1B0GVH6 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C13orf42A0A1B0GVH6 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.67■□□□□ 0.58
C13orf42A0A1B0GVH6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C13orf42A0A1B0GVH6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
C13orf42A0A1B0GVH6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
C13orf42A0A1B0GVH6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
C13orf42A0A1B0GVH6 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C13orf42A0A1B0GVH6 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
C13orf42A0A1B0GVH6 MIR6765-201ENST00000614092 87 ntBASIC18.66■□□□□ 0.58
C13orf42A0A1B0GVH6 AC129492.7-201ENST00000622992 756 ntBASIC18.66■□□□□ 0.58
C13orf42A0A1B0GVH6 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C13orf42A0A1B0GVH6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.66■□□□□ 0.58
C13orf42A0A1B0GVH6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C13orf42A0A1B0GVH6 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
C13orf42A0A1B0GVH6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C13orf42A0A1B0GVH6 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
C13orf42A0A1B0GVH6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.65■□□□□ 0.58
C13orf42A0A1B0GVH6 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
C13orf42A0A1B0GVH6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
C13orf42A0A1B0GVH6 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C13orf42A0A1B0GVH6 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
C13orf42A0A1B0GVH6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.65■□□□□ 0.58
C13orf42A0A1B0GVH6 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.65■□□□□ 0.58
C13orf42A0A1B0GVH6 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.65■□□□□ 0.58
C13orf42A0A1B0GVH6 AC012354.3-201ENST00000623734 483 ntBASIC18.65■□□□□ 0.58
C13orf42A0A1B0GVH6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.65■□□□□ 0.58
C13orf42A0A1B0GVH6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.65■□□□□ 0.58
C13orf42A0A1B0GVH6 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.65■□□□□ 0.58
C13orf42A0A1B0GVH6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
C13orf42A0A1B0GVH6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
C13orf42A0A1B0GVH6 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.65■□□□□ 0.58
C13orf42A0A1B0GVH6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C13orf42A0A1B0GVH6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
C13orf42A0A1B0GVH6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.64■□□□□ 0.58
C13orf42A0A1B0GVH6 DUX4L9-201ENST00000449051 1259 ntBASIC18.64■□□□□ 0.57
C13orf42A0A1B0GVH6 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.64■□□□□ 0.57
C13orf42A0A1B0GVH6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.64■□□□□ 0.57
C13orf42A0A1B0GVH6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
C13orf42A0A1B0GVH6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
C13orf42A0A1B0GVH6 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C13orf42A0A1B0GVH6 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.64■□□□□ 0.57
C13orf42A0A1B0GVH6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.64■□□□□ 0.57
C13orf42A0A1B0GVH6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.63■□□□□ 0.57
C13orf42A0A1B0GVH6 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C13orf42A0A1B0GVH6 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C13orf42A0A1B0GVH6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C13orf42A0A1B0GVH6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.63■□□□□ 0.57
C13orf42A0A1B0GVH6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms