Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC15.69■□□□□ 0.1
TRBV10-1A0A0K0K1A3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV10-1A0A0K0K1A3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV10-1A0A0K0K1A3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV10-1A0A0K0K1A3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV10-1A0A0K0K1A3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV10-1A0A0K0K1A3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV10-1A0A0K0K1A3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV10-1A0A0K0K1A3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRBV10-1A0A0K0K1A3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV10-1A0A0K0K1A3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV10-1A0A0K0K1A3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV10-1A0A0K0K1A3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV10-1A0A0K0K1A3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV10-1A0A0K0K1A3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV10-1A0A0K0K1A3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV10-1A0A0K0K1A3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV10-1A0A0K0K1A3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV10-1A0A0K0K1A3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV10-1A0A0K0K1A3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV10-1A0A0K0K1A3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC15.68■□□□□ 0.1
TRBV10-1A0A0K0K1A3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC15.68■□□□□ 0.1
TRBV10-1A0A0K0K1A3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV10-1A0A0K0K1A3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRBV10-1A0A0K0K1A3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
TRBV10-1A0A0K0K1A3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV10-1A0A0K0K1A3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC15.67■□□□□ 0.1
TRBV10-1A0A0K0K1A3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV10-1A0A0K0K1A3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC15.67■□□□□ 0.1
TRBV10-1A0A0K0K1A3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV10-1A0A0K0K1A3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC15.67■□□□□ 0.1
TRBV10-1A0A0K0K1A3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRBV10-1A0A0K0K1A3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC15.67■□□□□ 0.1
TRBV10-1A0A0K0K1A3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRBV10-1A0A0K0K1A3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV10-1A0A0K0K1A3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV10-1A0A0K0K1A3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV10-1A0A0K0K1A3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV10-1A0A0K0K1A3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV10-1A0A0K0K1A3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV10-1A0A0K0K1A3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV10-1A0A0K0K1A3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV10-1A0A0K0K1A3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV10-1A0A0K0K1A3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV10-1A0A0K0K1A3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV10-1A0A0K0K1A3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV10-1A0A0K0K1A3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV10-1A0A0K0K1A3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV10-1A0A0K0K1A3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV10-1A0A0K0K1A3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRBV10-1A0A0K0K1A3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV10-1A0A0K0K1A3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV10-1A0A0K0K1A3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV10-1A0A0K0K1A3 KRT125P-201ENST00000546827 989 ntBASIC15.65■□□□□ 0.1
TRBV10-1A0A0K0K1A3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRBV10-1A0A0K0K1A3 Z92544.1-202ENST00000571933 1220 ntBASIC15.65■□□□□ 0.1
TRBV10-1A0A0K0K1A3 AC009086.3-201ENST00000623486 1008 ntBASIC15.65■□□□□ 0.1
TRBV10-1A0A0K0K1A3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
TRBV10-1A0A0K0K1A3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC15.65■□□□□ 0.1
TRBV10-1A0A0K0K1A3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRBV10-1A0A0K0K1A3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV10-1A0A0K0K1A3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV10-1A0A0K0K1A3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC15.64■□□□□ 0.09
TRBV10-1A0A0K0K1A3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV10-1A0A0K0K1A3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV10-1A0A0K0K1A3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV10-1A0A0K0K1A3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC15.64■□□□□ 0.09
TRBV10-1A0A0K0K1A3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV10-1A0A0K0K1A3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
TRBV10-1A0A0K0K1A3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC15.64■□□□□ 0.09
TRBV10-1A0A0K0K1A3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC15.64■□□□□ 0.09
TRBV10-1A0A0K0K1A3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV10-1A0A0K0K1A3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC15.64■□□□□ 0.09
TRBV10-1A0A0K0K1A3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC15.64■□□□□ 0.09
TRBV10-1A0A0K0K1A3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV10-1A0A0K0K1A3 EP400NL-214ENST00000641289 2402 ntBASIC15.64■□□□□ 0.09
TRBV10-1A0A0K0K1A3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC15.64■□□□□ 0.09
TRBV10-1A0A0K0K1A3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC15.63■□□□□ 0.09
TRBV10-1A0A0K0K1A3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV10-1A0A0K0K1A3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV10-1A0A0K0K1A3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV10-1A0A0K0K1A3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRBV10-1A0A0K0K1A3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV10-1A0A0K0K1A3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC15.63■□□□□ 0.09
TRBV10-1A0A0K0K1A3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV10-1A0A0K0K1A3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRBV10-1A0A0K0K1A3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRBV10-1A0A0K0K1A3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC15.63■□□□□ 0.09
TRBV10-1A0A0K0K1A3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC15.63■□□□□ 0.09
TRBV10-1A0A0K0K1A3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV10-1A0A0K0K1A3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC15.63■□□□□ 0.09
TRBV10-1A0A0K0K1A3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC15.63■□□□□ 0.09
TRBV10-1A0A0K0K1A3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
TRBV10-1A0A0K0K1A3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV10-1A0A0K0K1A3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV10-1A0A0K0K1A3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV10-1A0A0K0K1A3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV10-1A0A0K0K1A3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
TRBV10-1A0A0K0K1A3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV10-1A0A0K0K1A3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms