Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV41A0A0B4J266 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV41A0A0B4J266 AC096631.2-201ENST00000436136 790 ntBASIC17.49■□□□□ 0.39
TRAV41A0A0B4J266 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV41A0A0B4J266 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV41A0A0B4J266 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAV41A0A0B4J266 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
TRAV41A0A0B4J266 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV41A0A0B4J266 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV41A0A0B4J266 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV41A0A0B4J266 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV41A0A0B4J266 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV41A0A0B4J266 UNC93B3-201ENST00000308076 687 ntBASIC17.48■□□□□ 0.39
TRAV41A0A0B4J266 SERBP1P1-201ENST00000396021 1160 ntBASIC17.48■□□□□ 0.39
TRAV41A0A0B4J266 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV41A0A0B4J266 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV41A0A0B4J266 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.48■□□□□ 0.39
TRAV41A0A0B4J266 MIR3181-201ENST00000578512 73 ntBASIC17.48■□□□□ 0.39
TRAV41A0A0B4J266 AL138724.1-201ENST00000606771 1088 ntBASIC17.48■□□□□ 0.39
TRAV41A0A0B4J266 DUSP8P5-201ENST00000422884 1815 ntBASIC17.48■□□□□ 0.39
TRAV41A0A0B4J266 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV41A0A0B4J266 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV41A0A0B4J266 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV41A0A0B4J266 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV41A0A0B4J266 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV41A0A0B4J266 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV41A0A0B4J266 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.47■□□□□ 0.39
TRAV41A0A0B4J266 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV41A0A0B4J266 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.47■□□□□ 0.39
TRAV41A0A0B4J266 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV41A0A0B4J266 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV41A0A0B4J266 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.47■□□□□ 0.39
TRAV41A0A0B4J266 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRAV41A0A0B4J266 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.47■□□□□ 0.39
TRAV41A0A0B4J266 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV41A0A0B4J266 AL499627.2-201ENST00000606283 725 ntBASIC17.47■□□□□ 0.39
TRAV41A0A0B4J266 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV41A0A0B4J266 DUSP8P3-201ENST00000399571 1760 ntBASIC17.47■□□□□ 0.39
TRAV41A0A0B4J266 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TRAV41A0A0B4J266 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV41A0A0B4J266 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV41A0A0B4J266 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
TRAV41A0A0B4J266 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV41A0A0B4J266 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRAV41A0A0B4J266 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
TRAV41A0A0B4J266 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.46■□□□□ 0.39
TRAV41A0A0B4J266 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV41A0A0B4J266 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV41A0A0B4J266 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV41A0A0B4J266 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV41A0A0B4J266 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TRAV41A0A0B4J266 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAV41A0A0B4J266 AL136162.1-201ENST00000607711 1078 ntBASIC17.46■□□□□ 0.39
TRAV41A0A0B4J266 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV41A0A0B4J266 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
TRAV41A0A0B4J266 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV41A0A0B4J266 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.46■□□□□ 0.39
TRAV41A0A0B4J266 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV41A0A0B4J266 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAV41A0A0B4J266 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.46■□□□□ 0.38
TRAV41A0A0B4J266 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
TRAV41A0A0B4J266 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV41A0A0B4J266 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAV41A0A0B4J266 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV41A0A0B4J266 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV41A0A0B4J266 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TRAV41A0A0B4J266 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TRAV41A0A0B4J266 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAV41A0A0B4J266 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV41A0A0B4J266 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV41A0A0B4J266 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TRAV41A0A0B4J266 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAV41A0A0B4J266 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAV41A0A0B4J266 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV41A0A0B4J266 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV41A0A0B4J266 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV41A0A0B4J266 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAV41A0A0B4J266 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAV41A0A0B4J266 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV41A0A0B4J266 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.44■□□□□ 0.38
TRAV41A0A0B4J266 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV41A0A0B4J266 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TRAV41A0A0B4J266 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV41A0A0B4J266 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV41A0A0B4J266 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV41A0A0B4J266 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.44■□□□□ 0.38
TRAV41A0A0B4J266 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.44■□□□□ 0.38
TRAV41A0A0B4J266 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAV41A0A0B4J266 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV41A0A0B4J266 AC011298.3-201ENST00000615796 283 ntBASIC17.44■□□□□ 0.38
TRAV41A0A0B4J266 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TRAV41A0A0B4J266 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV41A0A0B4J266 AC135279.3-201ENST00000610945 1311 ntBASIC17.44■□□□□ 0.38
TRAV41A0A0B4J266 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV41A0A0B4J266 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV41A0A0B4J266 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV41A0A0B4J266 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV41A0A0B4J266 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV41A0A0B4J266 AC133637.1-201ENST00000624115 1537 ntBASIC17.43■□□□□ 0.38
TRAV41A0A0B4J266 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms