Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.61■□□□□ 0.57
TRBV6-7A0A0A0MS04 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.61■□□□□ 0.57
TRBV6-7A0A0A0MS04 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV6-7A0A0A0MS04 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV6-7A0A0A0MS04 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.61■□□□□ 0.57
TRBV6-7A0A0A0MS04 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV6-7A0A0A0MS04 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.61■□□□□ 0.57
TRBV6-7A0A0A0MS04 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV6-7A0A0A0MS04 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
TRBV6-7A0A0A0MS04 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV6-7A0A0A0MS04 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV6-7A0A0A0MS04 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV6-7A0A0A0MS04 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV6-7A0A0A0MS04 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.6■□□□□ 0.57
TRBV6-7A0A0A0MS04 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV6-7A0A0A0MS04 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV6-7A0A0A0MS04 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV6-7A0A0A0MS04 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV6-7A0A0A0MS04 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV6-7A0A0A0MS04 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.59■□□□□ 0.57
TRBV6-7A0A0A0MS04 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV6-7A0A0A0MS04 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.59■□□□□ 0.57
TRBV6-7A0A0A0MS04 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV6-7A0A0A0MS04 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV6-7A0A0A0MS04 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV6-7A0A0A0MS04 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.59■□□□□ 0.57
TRBV6-7A0A0A0MS04 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV6-7A0A0A0MS04 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.59■□□□□ 0.57
TRBV6-7A0A0A0MS04 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.59■□□□□ 0.57
TRBV6-7A0A0A0MS04 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV6-7A0A0A0MS04 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
TRBV6-7A0A0A0MS04 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRBV6-7A0A0A0MS04 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
TRBV6-7A0A0A0MS04 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRBV6-7A0A0A0MS04 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.58■□□□□ 0.57
TRBV6-7A0A0A0MS04 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRBV6-7A0A0A0MS04 TSPY13P-201ENST00000338964 914 ntBASIC18.58■□□□□ 0.56
TRBV6-7A0A0A0MS04 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.58■□□□□ 0.56
TRBV6-7A0A0A0MS04 AC010980.1-201ENST00000587192 1142 ntBASIC18.58■□□□□ 0.56
TRBV6-7A0A0A0MS04 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
TRBV6-7A0A0A0MS04 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.58■□□□□ 0.56
TRBV6-7A0A0A0MS04 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV6-7A0A0A0MS04 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.58■□□□□ 0.56
TRBV6-7A0A0A0MS04 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV6-7A0A0A0MS04 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
TRBV6-7A0A0A0MS04 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.58■□□□□ 0.56
TRBV6-7A0A0A0MS04 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.58■□□□□ 0.56
TRBV6-7A0A0A0MS04 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV6-7A0A0A0MS04 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV6-7A0A0A0MS04 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV6-7A0A0A0MS04 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TRBV6-7A0A0A0MS04 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV6-7A0A0A0MS04 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TRBV6-7A0A0A0MS04 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV6-7A0A0A0MS04 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TRBV6-7A0A0A0MS04 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV6-7A0A0A0MS04 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV6-7A0A0A0MS04 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV6-7A0A0A0MS04 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.57■□□□□ 0.56
TRBV6-7A0A0A0MS04 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.57■□□□□ 0.56
TRBV6-7A0A0A0MS04 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.57■□□□□ 0.56
TRBV6-7A0A0A0MS04 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV6-7A0A0A0MS04 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.57■□□□□ 0.56
TRBV6-7A0A0A0MS04 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV6-7A0A0A0MS04 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TRBV6-7A0A0A0MS04 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV6-7A0A0A0MS04 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRBV6-7A0A0A0MS04 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.56■□□□□ 0.56
TRBV6-7A0A0A0MS04 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TRBV6-7A0A0A0MS04 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV6-7A0A0A0MS04 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.56■□□□□ 0.56
TRBV6-7A0A0A0MS04 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV6-7A0A0A0MS04 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.56■□□□□ 0.56
TRBV6-7A0A0A0MS04 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV6-7A0A0A0MS04 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV6-7A0A0A0MS04 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TRBV6-7A0A0A0MS04 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV6-7A0A0A0MS04 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TRBV6-7A0A0A0MS04 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV6-7A0A0A0MS04 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.55■□□□□ 0.56
TRBV6-7A0A0A0MS04 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV6-7A0A0A0MS04 AL353803.4-201ENST00000565882 1934 ntBASIC18.55■□□□□ 0.56
TRBV6-7A0A0A0MS04 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.55■□□□□ 0.56
TRBV6-7A0A0A0MS04 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.55■□□□□ 0.56
TRBV6-7A0A0A0MS04 MIR4508-201ENST00000584178 70 ntBASIC18.55■□□□□ 0.56
TRBV6-7A0A0A0MS04 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
TRBV6-7A0A0A0MS04 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV6-7A0A0A0MS04 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
TRBV6-7A0A0A0MS04 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV6-7A0A0A0MS04 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV6-7A0A0A0MS04 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV6-7A0A0A0MS04 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TRBV6-7A0A0A0MS04 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV6-7A0A0A0MS04 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV6-7A0A0A0MS04 C11orf96-202ENST00000528572 1834 ntBASIC18.54■□□□□ 0.56
TRBV6-7A0A0A0MS04 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.54■□□□□ 0.56
TRBV6-7A0A0A0MS04 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.54■□□□□ 0.56
TRBV6-7A0A0A0MS04 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.54■□□□□ 0.56
TRBV6-7A0A0A0MS04 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.54■□□□□ 0.56
TRBV6-7A0A0A0MS04 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms