Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV18A0A075B6X5 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TRAV18A0A075B6X5 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TRAV18A0A075B6X5 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV18A0A075B6X5 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TRAV18A0A075B6X5 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.11■□□□□ 0.65
TRAV18A0A075B6X5 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV18A0A075B6X5 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV18A0A075B6X5 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV18A0A075B6X5 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV18A0A075B6X5 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV18A0A075B6X5 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.1■□□□□ 0.65
TRAV18A0A075B6X5 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.1■□□□□ 0.65
TRAV18A0A075B6X5 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV18A0A075B6X5 GPX1-201ENST00000419349 1106 ntBASIC19.1■□□□□ 0.65
TRAV18A0A075B6X5 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV18A0A075B6X5 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV18A0A075B6X5 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV18A0A075B6X5 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.1■□□□□ 0.65
TRAV18A0A075B6X5 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV18A0A075B6X5 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV18A0A075B6X5 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.1■□□□□ 0.65
TRAV18A0A075B6X5 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV18A0A075B6X5 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
TRAV18A0A075B6X5 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV18A0A075B6X5 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV18A0A075B6X5 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV18A0A075B6X5 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV18A0A075B6X5 MIR7108-201ENST00000614319 87 ntBASIC19.09■□□□□ 0.65
TRAV18A0A075B6X5 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
TRAV18A0A075B6X5 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV18A0A075B6X5 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV18A0A075B6X5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.09■□□□□ 0.65
TRAV18A0A075B6X5 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV18A0A075B6X5 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV18A0A075B6X5 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV18A0A075B6X5 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV18A0A075B6X5 FBXW4P1-201ENST00000426721 2239 ntBASIC19.08■□□□□ 0.65
TRAV18A0A075B6X5 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV18A0A075B6X5 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.08■□□□□ 0.65
TRAV18A0A075B6X5 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV18A0A075B6X5 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
TRAV18A0A075B6X5 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV18A0A075B6X5 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TRAV18A0A075B6X5 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
TRAV18A0A075B6X5 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.08■□□□□ 0.64
TRAV18A0A075B6X5 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TRAV18A0A075B6X5 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV18A0A075B6X5 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAV18A0A075B6X5 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.07■□□□□ 0.64
TRAV18A0A075B6X5 SPCS2P3-201ENST00000500401 656 ntBASIC19.07■□□□□ 0.64
TRAV18A0A075B6X5 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TRAV18A0A075B6X5 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.07■□□□□ 0.64
TRAV18A0A075B6X5 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
TRAV18A0A075B6X5 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV18A0A075B6X5 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TRAV18A0A075B6X5 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TRAV18A0A075B6X5 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV18A0A075B6X5 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV18A0A075B6X5 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV18A0A075B6X5 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV18A0A075B6X5 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV18A0A075B6X5 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV18A0A075B6X5 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV18A0A075B6X5 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV18A0A075B6X5 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV18A0A075B6X5 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAV18A0A075B6X5 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TRAV18A0A075B6X5 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV18A0A075B6X5 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV18A0A075B6X5 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAV18A0A075B6X5 AC080038.3-201ENST00000623346 1952 ntBASIC19.05■□□□□ 0.64
TRAV18A0A075B6X5 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAV18A0A075B6X5 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAV18A0A075B6X5 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV18A0A075B6X5 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.05■□□□□ 0.64
TRAV18A0A075B6X5 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV18A0A075B6X5 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV18A0A075B6X5 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV18A0A075B6X5 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV18A0A075B6X5 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV18A0A075B6X5 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV18A0A075B6X5 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV18A0A075B6X5 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV18A0A075B6X5 AL353803.4-201ENST00000565882 1934 ntBASIC19.04■□□□□ 0.64
TRAV18A0A075B6X5 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV18A0A075B6X5 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV18A0A075B6X5 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV18A0A075B6X5 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV18A0A075B6X5 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV18A0A075B6X5 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV18A0A075B6X5 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV18A0A075B6X5 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.03■□□□□ 0.64
TRAV18A0A075B6X5 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TRAV18A0A075B6X5 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
TRAV18A0A075B6X5 AL592293.1-201ENST00000502889 1188 ntBASIC19.03■□□□□ 0.64
TRAV18A0A075B6X5 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.03■□□□□ 0.64
TRAV18A0A075B6X5 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV18A0A075B6X5 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.03■□□□□ 0.64
TRAV18A0A075B6X5 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms