Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 RN7SL530P-201ENST00000485097 298 ntBASIC10.4□□□□□ -0.74
VGLL1Q99990 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC10.4□□□□□ -0.74
VGLL1Q99990 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC10.4□□□□□ -0.74
VGLL1Q99990 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC10.4□□□□□ -0.74
VGLL1Q99990 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC10.4□□□□□ -0.74
VGLL1Q99990 SNORD3B-2-202ENST00000571722 791 ntBASIC10.4□□□□□ -0.74
VGLL1Q99990 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC10.4□□□□□ -0.74
VGLL1Q99990 RN7SL163P-201ENST00000583100 276 ntBASIC10.4□□□□□ -0.74
VGLL1Q99990 AC009542.2-202ENST00000619004 1067 ntBASIC10.4□□□□□ -0.74
VGLL1Q99990 AC022748.3-201ENST00000621828 275 ntBASIC10.4□□□□□ -0.74
VGLL1Q99990 AL035252.4-201ENST00000624174 288 ntBASIC10.4□□□□□ -0.74
VGLL1Q99990 DDC-204ENST00000426377 1700 ntTSL 3 BASIC10.4□□□□□ -0.74
VGLL1Q99990 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
VGLL1Q99990 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 AC004554.1-201ENST00000422830 1468 ntBASIC10.4□□□□□ -0.74
VGLL1Q99990 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 RCC2P5-201ENST00000492126 1487 ntBASIC10.4□□□□□ -0.74
VGLL1Q99990 CREBBP-202ENST00000382070 7598 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
VGLL1Q99990 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC10.4□□□□□ -0.74
VGLL1Q99990 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
VGLL1Q99990 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
VGLL1Q99990 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
VGLL1Q99990 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.75
VGLL1Q99990 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
VGLL1Q99990 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
VGLL1Q99990 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC10.4□□□□□ -0.75
VGLL1Q99990 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
VGLL1Q99990 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC10.4□□□□□ -0.75
VGLL1Q99990 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VGLL1Q99990 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC10.39□□□□□ -0.75
VGLL1Q99990 NRADDP-202ENST00000641269 1585 ntBASIC10.39□□□□□ -0.75
VGLL1Q99990 GDA-203ENST00000376986 1771 ntTSL 2 BASIC10.39□□□□□ -0.75
VGLL1Q99990 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VGLL1Q99990 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC10.39□□□□□ -0.75
VGLL1Q99990 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
VGLL1Q99990 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC10.39□□□□□ -0.75
VGLL1Q99990 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
VGLL1Q99990 PER1-202ENST00000354903 3115 ntTSL 2 BASIC10.39□□□□□ -0.75
VGLL1Q99990 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
VGLL1Q99990 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VGLL1Q99990 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VGLL1Q99990 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VGLL1Q99990 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VGLL1Q99990 IL9RP3-201ENST00000442856 1674 ntBASIC10.39□□□□□ -0.75
VGLL1Q99990 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC10.39□□□□□ -0.75
VGLL1Q99990 AC040160.2-201ENST00000623816 1675 ntBASIC10.39□□□□□ -0.75
VGLL1Q99990 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VGLL1Q99990 KRT8P43-201ENST00000406052 1458 ntBASIC10.39□□□□□ -0.75
VGLL1Q99990 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VGLL1Q99990 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC10.39□□□□□ -0.75
VGLL1Q99990 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC10.39□□□□□ -0.75
VGLL1Q99990 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VGLL1Q99990 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VGLL1Q99990 SMS-201ENST00000379404 1174 ntTSL 3 BASIC10.39□□□□□ -0.75
VGLL1Q99990 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
VGLL1Q99990 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC10.39□□□□□ -0.75
VGLL1Q99990 STX1A-203ENST00000395155 783 ntTSL 2 BASIC10.39□□□□□ -0.75
VGLL1Q99990 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC10.39□□□□□ -0.75
VGLL1Q99990 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC10.39□□□□□ -0.75
VGLL1Q99990 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC10.39□□□□□ -0.75
VGLL1Q99990 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC10.39□□□□□ -0.75
VGLL1Q99990 U91328.1-201ENST00000437528 223 ntBASIC10.39□□□□□ -0.75
VGLL1Q99990 Z93015.1-201ENST00000451718 390 ntBASIC10.39□□□□□ -0.75
VGLL1Q99990 RHEB-207ENST00000496004 744 ntTSL 2 BASIC10.39□□□□□ -0.75
VGLL1Q99990 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
VGLL1Q99990 SLC25A15P3-201ENST00000505530 290 ntBASIC10.39□□□□□ -0.75
VGLL1Q99990 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC10.39□□□□□ -0.75
VGLL1Q99990 AC009779.1-201ENST00000551138 283 ntBASIC10.39□□□□□ -0.75
VGLL1Q99990 EID1-202ENST00000560490 584 ntTSL 3 BASIC10.39□□□□□ -0.75
VGLL1Q99990 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC10.39□□□□□ -0.75
VGLL1Q99990 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC10.39□□□□□ -0.75
VGLL1Q99990 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC10.39□□□□□ -0.75
VGLL1Q99990 AC010328.2-201ENST00000597698 1111 ntBASIC10.39□□□□□ -0.75
VGLL1Q99990 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC10.39□□□□□ -0.75
VGLL1Q99990 AL096828.3-201ENST00000615354 462 ntBASIC10.39□□□□□ -0.75
VGLL1Q99990 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
VGLL1Q99990 AC079336.7-201ENST00000623428 1078 ntBASIC10.39□□□□□ -0.75
VGLL1Q99990 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC10.39□□□□□ -0.75
VGLL1Q99990 AC010536.1-201ENST00000538868 2611 ntBASIC10.39□□□□□ -0.75
VGLL1Q99990 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
VGLL1Q99990 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VGLL1Q99990 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
VGLL1Q99990 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC10.39□□□□□ -0.75
VGLL1Q99990 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VGLL1Q99990 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VGLL1Q99990 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
VGLL1Q99990 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VGLL1Q99990 AC092117.1-201ENST00000621230 3250 ntBASIC10.39□□□□□ -0.75
VGLL1Q99990 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC10.39□□□□□ -0.75
VGLL1Q99990 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
VGLL1Q99990 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
VGLL1Q99990 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VGLL1Q99990 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VGLL1Q99990 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC10.39□□□□□ -0.75
VGLL1Q99990 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms