Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CNOT4O95628 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CNOT4O95628 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CNOT4O95628 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.2□□□□□ -0.46
CNOT4O95628 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CNOT4O95628 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CNOT4O95628 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.2□□□□□ -0.46
CNOT4O95628 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CNOT4O95628 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CNOT4O95628 SALL4P6-201ENST00000429385 1691 ntBASIC12.2□□□□□ -0.46
CNOT4O95628 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CNOT4O95628 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CNOT4O95628 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CNOT4O95628 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CNOT4O95628 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CNOT4O95628 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CNOT4O95628 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CNOT4O95628 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
CNOT4O95628 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CNOT4O95628 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CNOT4O95628 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CNOT4O95628 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CNOT4O95628 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CNOT4O95628 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC12.2□□□□□ -0.46
CNOT4O95628 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC12.2□□□□□ -0.46
CNOT4O95628 RNA5SP406-201ENST00000516106 112 ntBASIC12.2□□□□□ -0.46
CNOT4O95628 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CNOT4O95628 NEU3-207ENST00000534628 746 ntTSL 2 BASIC12.2□□□□□ -0.46
CNOT4O95628 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CNOT4O95628 CR383656.3-201ENST00000551315 183 ntBASIC12.2□□□□□ -0.46
CNOT4O95628 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC12.2□□□□□ -0.46
CNOT4O95628 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC12.2□□□□□ -0.46
CNOT4O95628 RN7SL371P-201ENST00000578099 267 ntBASIC12.2□□□□□ -0.46
CNOT4O95628 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CNOT4O95628 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC12.2□□□□□ -0.46
CNOT4O95628 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CNOT4O95628 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CNOT4O95628 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CNOT4O95628 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.2□□□□□ -0.46
CNOT4O95628 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CNOT4O95628 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CNOT4O95628 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CNOT4O95628 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CNOT4O95628 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CNOT4O95628 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CNOT4O95628 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
CNOT4O95628 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CNOT4O95628 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CNOT4O95628 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.2□□□□□ -0.46
CNOT4O95628 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CNOT4O95628 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CNOT4O95628 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CNOT4O95628 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CNOT4O95628 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.19□□□□□ -0.46
CNOT4O95628 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.19□□□□□ -0.46
CNOT4O95628 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CNOT4O95628 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC12.19□□□□□ -0.46
CNOT4O95628 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC12.19□□□□□ -0.46
CNOT4O95628 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.19□□□□□ -0.46
CNOT4O95628 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CNOT4O95628 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CNOT4O95628 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CNOT4O95628 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CNOT4O95628 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CNOT4O95628 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
CNOT4O95628 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
CNOT4O95628 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CNOT4O95628 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CNOT4O95628 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CNOT4O95628 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CNOT4O95628 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC12.19□□□□□ -0.46
CNOT4O95628 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC12.19□□□□□ -0.46
CNOT4O95628 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CNOT4O95628 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CNOT4O95628 AC100858.1-201ENST00000514059 1228 ntBASIC12.19□□□□□ -0.46
CNOT4O95628 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC12.19□□□□□ -0.46
CNOT4O95628 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC12.19□□□□□ -0.46
CNOT4O95628 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC12.19□□□□□ -0.46
CNOT4O95628 RNF146-211ENST00000609447 607 ntTSL 4 BASIC12.19□□□□□ -0.46
CNOT4O95628 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC12.19□□□□□ -0.46
CNOT4O95628 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CNOT4O95628 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CNOT4O95628 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC12.19□□□□□ -0.46
CNOT4O95628 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CNOT4O95628 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CNOT4O95628 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CNOT4O95628 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.19□□□□□ -0.46
CNOT4O95628 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CNOT4O95628 DDC-204ENST00000426377 1700 ntTSL 3 BASIC12.19□□□□□ -0.46
CNOT4O95628 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
CNOT4O95628 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CNOT4O95628 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CNOT4O95628 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.19□□□□□ -0.46
CNOT4O95628 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.19□□□□□ -0.46
CNOT4O95628 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CNOT4O95628 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CNOT4O95628 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CNOT4O95628 AC117503.4-201ENST00000623229 1418 ntBASIC12.19□□□□□ -0.46
CNOT4O95628 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CNOT4O95628 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms