Protein–RNA interactions for Protein: O00329

PIK3CD, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform, humanhuman

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3CDO00329 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
PIK3CDO00329 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3CDO00329 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3CDO00329 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC15.26■□□□□ 0.03
PIK3CDO00329 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3CDO00329 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3CDO00329 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3CDO00329 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3CDO00329 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC15.26■□□□□ 0.03
PIK3CDO00329 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3CDO00329 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3CDO00329 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PIK3CDO00329 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PIK3CDO00329 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3CDO00329 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3CDO00329 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3CDO00329 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3CDO00329 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3CDO00329 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3CDO00329 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PIK3CDO00329 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PIK3CDO00329 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PIK3CDO00329 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PIK3CDO00329 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC15.25■□□□□ 0.03
PIK3CDO00329 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PIK3CDO00329 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PIK3CDO00329 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC15.25■□□□□ 0.03
PIK3CDO00329 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
PIK3CDO00329 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PIK3CDO00329 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC15.25■□□□□ 0.03
PIK3CDO00329 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PIK3CDO00329 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PIK3CDO00329 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PIK3CDO00329 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PIK3CDO00329 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PIK3CDO00329 PGAM1P11-201ENST00000416729 680 ntBASIC15.25■□□□□ 0.03
PIK3CDO00329 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PIK3CDO00329 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC15.25■□□□□ 0.03
PIK3CDO00329 AL357140.1-201ENST00000454104 424 ntTSL 2 BASIC15.25■□□□□ 0.03
PIK3CDO00329 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC15.25■□□□□ 0.03
PIK3CDO00329 AC083801.1-201ENST00000491689 358 ntBASIC15.25■□□□□ 0.03
PIK3CDO00329 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC15.25■□□□□ 0.03
PIK3CDO00329 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC15.25■□□□□ 0.03
PIK3CDO00329 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC15.25■□□□□ 0.03
PIK3CDO00329 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC15.25■□□□□ 0.03
PIK3CDO00329 C2orf27AP1-201ENST00000618128 586 ntBASIC15.25■□□□□ 0.03
PIK3CDO00329 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PIK3CDO00329 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
PIK3CDO00329 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PIK3CDO00329 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PIK3CDO00329 MKRN5P-201ENST00000445263 1467 ntBASIC15.25■□□□□ 0.03
PIK3CDO00329 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PIK3CDO00329 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC15.25■□□□□ 0.03
PIK3CDO00329 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PIK3CDO00329 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PIK3CDO00329 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PIK3CDO00329 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PIK3CDO00329 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PIK3CDO00329 AC020931.1-201ENST00000589622 1346 ntBASIC15.24■□□□□ 0.03
PIK3CDO00329 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PIK3CDO00329 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PIK3CDO00329 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PIK3CDO00329 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PIK3CDO00329 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PIK3CDO00329 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PIK3CDO00329 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
PIK3CDO00329 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PIK3CDO00329 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PIK3CDO00329 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC15.24■□□□□ 0.03
PIK3CDO00329 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC15.24■□□□□ 0.03
PIK3CDO00329 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC15.24■□□□□ 0.03
PIK3CDO00329 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PIK3CDO00329 AC024028.1-201ENST00000437145 437 ntTSL 3 BASIC15.24■□□□□ 0.03
PIK3CDO00329 CCND3P1-201ENST00000438347 580 ntBASIC15.24■□□□□ 0.03
PIK3CDO00329 CISD2-202ENST00000503643 808 ntTSL 2 BASIC15.24■□□□□ 0.03
PIK3CDO00329 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC15.24■□□□□ 0.03
PIK3CDO00329 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC15.24■□□□□ 0.03
PIK3CDO00329 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC15.24■□□□□ 0.03
PIK3CDO00329 AC005357.2-202ENST00000590507 1060 ntBASIC15.24■□□□□ 0.03
PIK3CDO00329 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC15.24■□□□□ 0.03
PIK3CDO00329 MDC1-209ENST00000613547 830 ntTSL 5 BASIC15.24■□□□□ 0.03
PIK3CDO00329 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
PIK3CDO00329 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PIK3CDO00329 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
PIK3CDO00329 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PIK3CDO00329 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PIK3CDO00329 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PIK3CDO00329 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PIK3CDO00329 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PIK3CDO00329 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PIK3CDO00329 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.24■□□□□ 0.03
PIK3CDO00329 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PIK3CDO00329 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PIK3CDO00329 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PIK3CDO00329 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PIK3CDO00329 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PIK3CDO00329 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PIK3CDO00329 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PIK3CDO00329 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PIK3CDO00329 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms