Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 AL031719.1-201ENST00000623365 2587 ntBASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 PHB-210ENST00000511832 1509 ntTSL 2 BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 MIR557-201ENST00000385239 98 ntBASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 AL133466.1-201ENST00000447582 150 ntBASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 AC007279.1-201ENST00000448547 837 ntBASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 RPL18AP8-201ENST00000486071 528 ntBASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 RTN3P1-201ENST00000536295 711 ntBASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 KLF17P1-201ENST00000547105 1126 ntBASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 AC145285.5-201ENST00000562217 361 ntBASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 SIGLEC22P-201ENST00000599104 714 ntBASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 AC138627.1-207ENST00000641560 1006 ntBASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
HLA-DRB4X5D2U9 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 AC011481.3-201ENST00000623895 5594 ntBASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 MAPK10-262ENST00000641051 5738 ntBASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms