Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 AC134407.3-201ENST00000624035 2139 ntBASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 AC079328.1-201ENST00000560358 952 ntBASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 MIR3188-201ENST00000583494 85 ntBASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 HCG18-245ENST00000602550 559 ntTSL 4 BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 AC100757.4-201ENST00000626934 759 ntBASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 AC040160.2-201ENST00000623816 1675 ntBASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AMBRA1Q9C0C7 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 ABLIM3-203ENST00000356541 2290 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 ABLIM3-211ENST00000517451 2287 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 PHB-215ENST00000617874 1908 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 AC006033.2-201ENST00000609522 1968 ntTSL 2 BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 RNA5SP359-201ENST00000364838 113 ntBASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 AC007279.1-201ENST00000448547 837 ntBASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 CD81-209ENST00000492627 886 ntTSL 3 BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 AC125604.1-201ENST00000496255 707 ntBASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 MIR3940-201ENST00000579148 102 ntBASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 FGFR2-212ENST00000369060 3244 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 LINC00563-201ENST00000566370 1400 ntBASIC12.78□□□□□ -0.36
AMBRA1Q9C0C7 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms