Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 AL021578.1-201ENST00000613646 709 ntBASIC14.07□□□□□ -0.16
HDAC11Q96DB2 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
HDAC11Q96DB2 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC14.07□□□□□ -0.16
HDAC11Q96DB2 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC11Q96DB2 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC11Q96DB2 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC11Q96DB2 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC11Q96DB2 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.07□□□□□ -0.16
HDAC11Q96DB2 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC11Q96DB2 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC14.07□□□□□ -0.16
HDAC11Q96DB2 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC11Q96DB2 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC11Q96DB2 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC11Q96DB2 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
HDAC11Q96DB2 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC11Q96DB2 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
HDAC11Q96DB2 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
HDAC11Q96DB2 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC14.07□□□□□ -0.16
HDAC11Q96DB2 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC11Q96DB2 AC117503.4-201ENST00000623229 1418 ntBASIC14.07□□□□□ -0.16
HDAC11Q96DB2 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC11Q96DB2 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC14.07□□□□□ -0.16
HDAC11Q96DB2 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 AC012531.1-201ENST00000562848 2680 ntBASIC14.06□□□□□ -0.16
HDAC11Q96DB2 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 HLA-DMA-203ENST00000395305 777 ntBASIC14.06□□□□□ -0.16
HDAC11Q96DB2 CELP-201ENST00000411440 1249 ntTSL 5 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 BUD31-205ENST00000456893 512 ntTSL 5 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 RN7SL769P-201ENST00000469386 295 ntBASIC14.06□□□□□ -0.16
HDAC11Q96DB2 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 MSANTD2P1-201ENST00000445341 1368 ntBASIC14.06□□□□□ -0.16
HDAC11Q96DB2 FTX-216ENST00000638985 1367 ntTSL 5 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC11Q96DB2 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 AC104758.3-203ENST00000562938 2123 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms