Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.03□□□□□ -0.48
AP3S1Q92572 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
AP3S1Q92572 ECM1P1-201ENST00000604092 1279 ntBASIC12.03□□□□□ -0.48
AP3S1Q92572 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.03□□□□□ -0.48
AP3S1Q92572 HTR2C-203ENST00000371951 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S1Q92572 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
AP3S1Q92572 CTAGE7P-201ENST00000435712 2436 ntBASIC12.03□□□□□ -0.48
AP3S1Q92572 ENOSF1-203ENST00000383578 4188 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S1Q92572 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S1Q92572 RGPD5-203ENST00000393283 3304 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S1Q92572 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S1Q92572 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S1Q92572 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S1Q92572 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.03□□□□□ -0.48
AP3S1Q92572 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S1Q92572 LINC01987-201ENST00000593118 2281 ntTSL 2 BASIC12.03□□□□□ -0.48
AP3S1Q92572 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC12.03□□□□□ -0.48
AP3S1Q92572 AL357140.3-201ENST00000639753 1983 ntBASIC12.03□□□□□ -0.48
AP3S1Q92572 TRERF1-202ENST00000354325 4138 ntTSL 5 BASIC12.03□□□□□ -0.48
AP3S1Q92572 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S1Q92572 HECW1-201ENST00000395891 9501 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S1Q92572 JAM3-201ENST00000299106 3912 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S1Q92572 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.03□□□□□ -0.48
AP3S1Q92572 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
AP3S1Q92572 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
AP3S1Q92572 SUN2-202ENST00000405510 4055 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
AP3S1Q92572 UBTFL8-201ENST00000426903 2112 ntBASIC12.02□□□□□ -0.48
AP3S1Q92572 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC12.02□□□□□ -0.48
AP3S1Q92572 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
AP3S1Q92572 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
AP3S1Q92572 AL357054.4-201ENST00000606285 2814 ntBASIC12.02□□□□□ -0.48
AP3S1Q92572 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
AP3S1Q92572 GOLGA8CP-201ENST00000446144 5237 ntBASIC12.02□□□□□ -0.48
AP3S1Q92572 GOLGA8F-201ENST00000526619 5237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
AP3S1Q92572 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
AP3S1Q92572 MARCH8-204ENST00000453424 5638 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
AP3S1Q92572 FSCN3-201ENST00000265825 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
AP3S1Q92572 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC12.02□□□□□ -0.49
AP3S1Q92572 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.02□□□□□ -0.49
AP3S1Q92572 TNS1-220ENST00000611415 6509 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
AP3S1Q92572 CASZ1-201ENST00000344008 4405 ntTSL 2 BASIC12.02□□□□□ -0.49
AP3S1Q92572 CACNB1-212ENST00000622445 3722 ntTSL 5 BASIC12.02□□□□□ -0.49
AP3S1Q92572 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S1Q92572 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S1Q92572 CNTNAP2-201ENST00000361727 9896 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S1Q92572 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S1Q92572 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S1Q92572 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.02□□□□□ -0.49
AP3S1Q92572 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S1Q92572 AC004890.2-204ENST00000481968 304 ntBASIC12.02□□□□□ -0.49
AP3S1Q92572 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.02□□□□□ -0.49
AP3S1Q92572 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.02□□□□□ -0.49
AP3S1Q92572 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.02□□□□□ -0.49
AP3S1Q92572 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S1Q92572 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S1Q92572 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S1Q92572 AC003686.1-201ENST00000550956 1034 ntBASIC12.02□□□□□ -0.49
AP3S1Q92572 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.02□□□□□ -0.49
AP3S1Q92572 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.02□□□□□ -0.49
AP3S1Q92572 MIR3940-201ENST00000579148 102 ntBASIC12.02□□□□□ -0.49
AP3S1Q92572 RN7SL713P-201ENST00000582127 302 ntBASIC12.02□□□□□ -0.49
AP3S1Q92572 MIR4687-201ENST00000583618 80 ntBASIC12.02□□□□□ -0.49
AP3S1Q92572 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S1Q92572 AC010327.4-202ENST00000591484 748 ntBASIC12.02□□□□□ -0.49
AP3S1Q92572 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.02□□□□□ -0.49
AP3S1Q92572 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.02□□□□□ -0.49
AP3S1Q92572 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.02□□□□□ -0.49
AP3S1Q92572 AL390754.1-201ENST00000619088 582 ntBASIC12.02□□□□□ -0.49
AP3S1Q92572 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
AP3S1Q92572 PITRM1-201ENST00000224949 3450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S1Q92572 MADD-207ENST00000402799 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S1Q92572 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
AP3S1Q92572 HYLS1-202ENST00000425380 2061 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
AP3S1Q92572 DAAM2-208ENST00000538976 6247 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S1Q92572 AC134312.5-201ENST00000568031 1313 ntBASIC12.02□□□□□ -0.49
AP3S1Q92572 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC12.02□□□□□ -0.49
AP3S1Q92572 MST1R-215ENST00000621387 4449 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S1Q92572 SMG6-201ENST00000263073 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S1Q92572 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S1Q92572 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.02□□□□□ -0.49
AP3S1Q92572 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
AP3S1Q92572 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.02□□□□□ -0.49
AP3S1Q92572 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S1Q92572 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC12.02□□□□□ -0.49
AP3S1Q92572 AP1M1-203ENST00000444449 2311 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S1Q92572 ESPNL-203ENST00000409506 3610 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S1Q92572 MPRIP-205ENST00000395811 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S1Q92572 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S1Q92572 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S1Q92572 MGLL-205ENST00000453507 4552 ntTSL 2 BASIC12.01□□□□□ -0.49
AP3S1Q92572 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S1Q92572 MSH6-213ENST00000614496 4150 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S1Q92572 PCDHGB2-201ENST00000522605 4602 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S1Q92572 IL12A-AS1-203ENST00000497452 2425 ntTSL 2 BASIC12.01□□□□□ -0.49
AP3S1Q92572 ERBB2-219ENST00000584601 4792 ntTSL 2 BASIC12.01□□□□□ -0.49
AP3S1Q92572 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S1Q92572 RHBDD1-201ENST00000341329 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S1Q92572 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
AP3S1Q92572 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
AP3S1Q92572 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms