Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 RPL17P11-201ENST00000417593 544 ntBASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 VENTXP3-201ENST00000546480 773 ntBASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 AC092723.2-201ENST00000624955 793 ntBASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 PCDHA6-201ENST00000378126 3267 ntBASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 AC092978.1-202ENST00000637590 1327 ntBASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 MSNP1-201ENST00000511640 1732 ntBASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 PFN2-202ENST00000423691 911 ntTSL 2 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 AC132812.1-201ENST00000583145 892 ntBASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 ST5-261ENST00000626808 1071 ntTSL 5 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 HELLS-212ENST00000630929 400 ntTSL 5 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 AC012531.1-201ENST00000562848 2680 ntBASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
LYSMD3Q7Z3D4 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms